Archangium violaceum: JQX13_37685
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Entry
JQX13_37685 CDS
T07137
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
avm
Archangium violaceum
Pathway
avm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JQX13_37685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avm03021
]
JQX13_37685
03400 DNA repair and recombination proteins [BR:
avm03400
]
JQX13_37685
Enzymes [BR:
avm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JQX13_37685
Transcription machinery [BR:
avm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JQX13_37685
DNA repair and recombination proteins [BR:
avm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JQX13_37685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Ribosomal_60s
Motif
Other DBs
NCBI-ProteinID:
QRK05834
LinkDB
All DBs
Position
8844028..8845101
Genome browser
AA seq
357 aa
AA seq
DB search
MADTFIAKNWRDLIKPRRLEVDQDSLSPTYGKFVAEPLERGFGTTLGNSLRRVLLSSLQG
AAITTVKIEGVDHEFTTIPEVAEDVTDIVLNLKEVLLRMHTNEPKTIRIEAEGPKEIKAG
DIIADQDVEILNPGHHICTVSEGGKVRMELTCRRGRGYVPAMANKVAGSPIGTIPIDSLF
SPIRKVNYQVTNARVGQVTDYDKLTLEVWTDGSVTPQDAVAYAAKIVKEQLTVFVNFDET
EEPVTVEAPKEEAKLNENLFRSVDELELSVRSANCLQQANIKTIGDLVQRTEAEMLKTKN
FGRKSLKEIKEILAEMGLSLGMKLENWPPKTPPPAPPPGAAAAAAGAAAAAASAPKA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacgttcatcgcgaagaactggcgcgacctcatcaagccccgccggctcgag
gtcgatcaggactcgctctcgcccacctacggcaagttcgtggccgagccgctcgagcgc
ggcttcggcaccacgctgggcaactcgctgcgtcgcgtgctcctgtcgtcgctgcagggc
gccgccatcaccacggtgaagatcgagggtgtggaccacgagttcaccaccatccccgag
gtggccgaggacgtcacggacatcgtgctgaacctgaaggaggtcctcctccggatgcac
acgaacgagcccaagacgatccgcatcgaggccgagggccccaaggagatcaaggccggt
gacatcatcgccgaccaggacgtggagatcctcaacccgggtcaccacatctgcaccgtc
tccgagggtggcaaggtccgcatggaactcacgtgccgccgcggccgtggctacgtgccg
gccatggcgaacaaggtggcgggctcgcccatcggcaccatccccatcgactcgctgttc
tcgcccatccgcaaggtgaactaccaggtgaccaacgcccgcgtcggtcaggtcaccgac
tacgacaagctcaccctcgaggtgtggacggacggctccgtcaccccgcaggatgccgtg
gcctacgcggccaagatcgtcaaggagcagctcacggtgttcgtcaacttcgacgagacc
gaggagcccgtgaccgtcgaggcgcccaaggaggaggccaagctcaacgagaacctcttc
cgctccgtggacgagctggagctctcggtgcgctcggccaactgcctgcagcaggccaac
atcaagaccatcggtgatctcgtgcagcgcaccgaggccgagatgctcaagaccaagaac
ttcggccgcaagtccttgaaggaaatcaaggagatcctcgcggagatgggcctgtcgctc
ggcatgaagctggagaactggcctccgaagaccccgcccccggctcccccgccgggtgcc
gccgcggctgccgctggcgccgccgccgccgccgcctccgcgccgaaggcctag
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