Archangium violaceum: JQX13_39410
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Entry
JQX13_39410 CDS
T07137
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
avm
Archangium violaceum
Pathway
avm00020
Citrate cycle (TCA cycle)
avm00190
Oxidative phosphorylation
avm00650
Butanoate metabolism
avm00720
Other carbon fixation pathways
avm01100
Metabolic pathways
avm01110
Biosynthesis of secondary metabolites
avm01120
Microbial metabolism in diverse environments
avm01200
Carbon metabolism
Module
avm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
avm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JQX13_39410 (sdhB)
00650 Butanoate metabolism
JQX13_39410 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
JQX13_39410 (sdhB)
00720 Other carbon fixation pathways
JQX13_39410 (sdhB)
Enzymes [BR:
avm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JQX13_39410 (sdhB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_10
Fer4_9
Fer4_7
Fer4_17
Fer4_2
Fer4_16
Fer4
Fer4_4
Fer4_21
Fer4_6
Fer4_13
Fer4_18
Fer4_3
AglB_L1
Motif
Other DBs
NCBI-ProteinID:
QRK06139
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All DBs
Position
9311104..9311934
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AA seq
276 aa
AA seq
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MDTATAQAPVSTTTKHVTFRIWRQNGPDGAGHFDEFRVPYSKGANVVSCLMEIQRNPVTT
DGRKVSPVIWDAACLEEVCGSCAMNINGRVRMACSALIDRIIGDGEPIITLEPMKKFPVT
RDLAVNRDRMFDALKRVKAWINIDGTHNLGPGPRQSQGDHSVMYKLSTCITCGSCLEACP
QVTIDNGFIGAAAISQARLFNMNPTGKMNAEERVRGLMGPGGIQDCGKAQNCVKVCPKEI
PLTTSIAVMNREVTKQIVKDIFFDQGEEKKSTSGPG
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcgaccgcgcaggcacctgtcagcaccaccacgaagcacgtcaccttccgc
atctggcggcagaacggtccggatggggcggggcacttcgacgagttccgcgtcccgtac
agcaagggcgcgaacgtcgtctcctgtctgatggagatccagcgcaacccggtcaccacc
gacggccgcaaggtctccccggtgatctgggacgccgcctgcctcgaggaggtgtgcggc
agctgcgccatgaacatcaacgggcgggtccgcatggcctgctcggcgctgatcgaccgc
atcatcggtgacggggagcccatcatcaccctggagccgatgaagaagttcccggtcacg
cgcgacctggcggtcaaccgtgaccgcatgttcgacgcgctcaagcgcgtgaaggcgtgg
atcaacatcgacggcacgcacaacctgggccccggtccgcgccagtcccagggggaccac
tcggtgatgtacaagctgtccacgtgcatcacgtgcggcagctgcctcgaggcgtgcccg
caggtgacgatcgacaacggcttcatcggcgccgccgccatcagccaggcccggctcttc
aacatgaaccccaccggcaagatgaacgccgaggagcgcgtccggggtctcatggggccg
ggcggtatccaggactgcggcaaggcgcagaactgcgtgaaggtgtgcccgaaggagatc
ccgctcaccacctccatcgcggtgatgaaccgcgaggtgaccaagcagatcgtcaaggac
atcttcttcgaccagggcgaggagaagaagtcgacgagcgggccgggctag
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