Archangium violaceum: JQX13_39530
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Entry
JQX13_39530 CDS
T07137
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
avm
Archangium violaceum
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avm03032
]
JQX13_39530
03400 DNA repair and recombination proteins [BR:
avm03400
]
JQX13_39530
Enzymes [BR:
avm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JQX13_39530
DNA replication proteins [BR:
avm03032
]
Prokaryotic type
DNA Topoisomerases
JQX13_39530
DNA repair and recombination proteins [BR:
avm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JQX13_39530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
PX
Motif
Other DBs
NCBI-ProteinID:
QRK06158
LinkDB
All DBs
Position
complement(9332953..9333996)
Genome browser
AA seq
347 aa
AA seq
DB search
MTHIERLRQDGIRRLGSPKRGFQYKQSNGKPVPARERERIEALKIPPAWTDVLISPSPTS
KLQAMGKDGAGRWQYRYHESFTKRREAEKYERIVDFARALPRLRRRVAADLRKPGLGRDK
VMACLLRILGTCFIRAGSQQYADENQSFGLATLRAKHVKVKGDTVIFDFPGKSGKQQHRE
LKDRQVARIVRECLKLPGRDVFKFRLDDGFVVDVRRRHINEYIQEVMGARYSAKDFRTWG
GTLICACALARAKERVRQEAAKSGQKVAKKTMVAAVKEVAEHLGNTPAVARDSYIYPSVL
AMFEKGHVVERYFDSVEELARHEKPALHCSEKALLEMIEDGKRPAAV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatatcgagagactgcgacaggatggaatccgtcggctcgggagccccaagcga
ggcttccagtacaagcagtcgaacgggaagccggtaccggctcgggaacgcgagcgcatc
gaggcgctgaagattccgcccgcgtggacggacgtgttgatcagcccgtcacccacgtcg
aagctgcaggccatggggaaggacggcgcggggcggtggcagtaccgctaccacgagtcc
ttcacgaagcgacgcgaggcggagaagtacgagcggatcgtcgacttcgcgagggcgctg
cccaggctgcggcggcgggtggcggcggatctgcgcaagccggggttgggacgagacaag
gtgatggcgtgcctgctgcggatcctcgggacgtgcttcatccgtgcggggagccagcag
tacgcggacgagaaccagagcttcgggctggccacgcttcgggcgaagcacgtcaaggtg
aagggcgacacggtcatcttcgacttcccgggcaagagcgggaagcagcagcaccgggag
ttgaaggatcggcaggtggctcgcatcgtgcgcgagtgcctgaagctgccgggacgggac
gtcttcaagttccggttggacgacgggttcgtggtggacgtgcggcggcgccacatcaac
gagtacatccaggaagtgatgggggcgcgctacagcgcgaaggacttccgcacgtggggc
gggacgctcatctgcgcgtgcgcgctggcccgggcgaaggagcgggtgcgccaggaagcc
gcgaagagcggacagaaggtcgcgaagaagacgatggtggcggcggtgaaggaggtggcc
gagcacctggggaacacgcccgcggtggcgagggactcgtacatctatccctcggtgctg
gcgatgttcgagaaggggcacgtggtggagcgctacttcgattccgtggaggagttggcg
cggcacgagaagcccgcgctgcactgctcggagaaggccctgctggagatgatcgaggac
ggcaagcggcccgcggcggtgtag
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