Archangium violaceum: JQX13_40150
Help
Entry
JQX13_40150 CDS
T07137
Name
(GenBank) thiol-activated cytolysin family protein
KO
K11031
thiol-activated cytolysin
Organism
avm
Archangium violaceum
Pathway
avm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JQX13_40150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
avm02042
]
JQX13_40150
Bacterial toxins [BR:
avm02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Beta-pore-forming/Cholesterol-dependent
JQX13_40150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thiol_cytolysin
Bundlin
Motif
Other DBs
NCBI-ProteinID:
QRK06271
LinkDB
All DBs
Position
9503054..9504625
Genome browser
AA seq
523 aa
AA seq
DB search
MNKLRSVLMLTGLSVAGLNACGGEPEGTSPAAPVGETVSVNQELIQNQAIFDYLTRLSPL
ILPTPSHSESTSTQEEVRDATINVCTYTQVSETSHFDKLVSFDPNADVLWPGALVQGQSL
SLGLLSPIGAPRAPGTITLTNARIDGSTPTEYVYSRTLASPSLASTHDAIQNILTAESVN
YAAKIAYTMHQAHSLNEGSVKAGIAVQFAGNSLNTTFGQQWTQSKTTILVDFTQSYYTVS
FGAPAEPSAFFAPSVTVDELRPFIYDGNPPGYLSSVTYGRRLLIKFESSEDSSKVSSTLD
VVFTKGKVGGSINLDYEQQKTLQNTKMTLLALGGPAGSAVEVIGTGLDKITSLQKYFQDG
ANFSPSSPGVPLSYTVRYLSNYQPLVVASTTSYTVPSCVGKTSTMSVALGELYIYANGET
IGKGEMNYDVYVGDSLVASGRNVKRGDKESIALNVSRMVTLLQQEGNSLRVRADVWENTK
KVTPGITHIFSTYLKDWSPKGYQEVIGEYKNLKVGLRYTVTPY
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacttcgaagcgtgttgatgctgacgggcctgtccgtcgcgggtctgaacgcc
tgtggaggagagcccgaggggacgtccccggccgcccccgtgggcgagacggtgagcgtg
aatcaggagctgatccagaaccaggcgatcttcgattacctcacccggctgtcgccgctc
atcctcccgacgccgagccatagcgagagcacctccacccaggaggaggtgcgtgacgcg
acgatcaacgtctgcacgtacacccaggtctcggagacgagccatttcgacaagctggtc
tccttcgatccgaacgcggatgtgctctggccgggtgcgctcgtgcaggggcagtcgctg
tcgctcgggctcctgtcgcccatcggggcgccgcgtgctccggggacgatcaccctgacc
aacgcgcggatcgacggttccacgccgaccgagtacgtgtacagccggaccctggcgtct
ccgagcctggcgagcacccatgacgcgatccagaacatcctgacggcggagagcgtcaac
tacgcggccaagatcgcctacacgatgcaccaggcgcactcgctcaacgagggctcggtc
aaggcgggcatcgcggtgcagttcgcgggcaactcgctcaacaccaccttcggccagcag
tggacgcagagcaagacgaccatcctggtggacttcacccagtcctattacaccgtctcc
ttcggggcgcccgcggagccctcggccttcttcgcgccgtccgtgacggtcgatgagctg
aggccgttcatctacgacggcaatccgcccggctacctcagctccgtcacgtatggccgc
cggctgctcatcaagttcgagtcctcggaggacagctccaaggtgtcctcgacgctcgac
gtcgtcttcacgaagggcaaggtgggcggctccatcaacctggactacgagcagcagaag
accctccagaacacgaagatgacgctcctggcgctgggcgggcccgccggcagcgcggtg
gaggtcatcggcaccggtctggacaagatcacctcgctccagaagtacttccaggatggg
gccaacttctcgccgagctctccgggtgttccgctgtcctatacggtgcgctacctgagc
aactaccagccgctcgtggtggcctcgacgaccagctacacggtgccgtcctgcgtcggg
aagacgtccaccatgtccgtggcgctgggcgagctgtacatctacgcgaacggagagacg
atcgggaagggcgagatgaactacgacgtctacgtgggcgactcgctcgtggcgtccggg
cgcaacgtgaagcgtggtgacaaggagagcatcgccctgaacgtgtcgcggatggtcacc
ctgctccagcaggagggcaactccctgcgggtgcgagcggatgtctgggagaacaccaag
aaggtcacccccggcatcacgcacatcttcagcacctacctgaaggactggtcgccgaag
gggtaccaggaggtcatcggcgagtacaagaacctgaaggtcggcctgcgctacaccgtc
acgccgtattga
DBGET
integrated database retrieval system
