Archangium violaceum: JQX13_40255
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Entry
JQX13_40255 CDS
T07137
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
avm
Archangium violaceum
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avm03032
]
JQX13_40255
03036 Chromosome and associated proteins [BR:
avm03036
]
JQX13_40255
03400 DNA repair and recombination proteins [BR:
avm03400
]
JQX13_40255
DNA replication proteins [BR:
avm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JQX13_40255
Chromosome and associated proteins [BR:
avm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
JQX13_40255
DNA repair and recombination proteins [BR:
avm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
JQX13_40255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QRK06288
LinkDB
All DBs
Position
9524765..9525199
Genome browser
AA seq
144 aa
AA seq
DB search
MTKADIIEGVYEKVGFSKKESAEIVELVFDTFKETLERGDKIKISGFGNFQVRQKKARVG
RNPQTGKEIEISARRVLTFRPSAVLKAALNGEQIPENHSELDAAEEAAADAAEAAGLDPE
DLDEELEELPEYKASVGGMKAKAE
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggcggacatcatcgaaggggtctacgagaaggtcggcttctccaagaaggag
tcggcggagatcgtcgagctcgtcttcgacaccttcaaggaaacgctcgagcgcggggac
aagatcaagatctcggggttcggcaacttccaggtgcgccagaagaaggcgcgcgtgggc
cgcaatccgcagaccggcaaggagatcgagatctcggcgcgtcgggtgctgaccttccgg
ccgagcgcggtgctgaaggccgcgctcaacggcgagcagattccggagaaccactccgag
ctggatgccgcggaggaggccgccgccgacgcggccgaggccgcgggtctggatcccgag
gatctggacgaggagctggaggagctcccggagtacaaggcttccgtgggcggaatgaag
gcgaaggccgaatga
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integrated database retrieval system
