Archangium violaceum: JQX13_42955
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Entry
JQX13_42955 CDS
T07137
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
avm
Archangium violaceum
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avm03016
]
JQX13_42955 (truD)
Enzymes [BR:
avm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
JQX13_42955 (truD)
Transfer RNA biogenesis [BR:
avm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JQX13_42955 (truD)
Prokaryotic type
JQX13_42955 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QRK06762
LinkDB
All DBs
Position
10170436..10171953
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AA seq
505 aa
AA seq
DB search
MRIKQKPEDFSVKESYRFDEVASGRHRVYLMDKQKLSTFDAADRIREAFGLKPGSISYCG
LKDKQGRTEQLIAVDGADVDMQDPDLRLKYLGRTDKPLSAANITSNRFAVTVRMLTEASI
GPLNQAAAEINRLGVVNYFDSQRFGSLKHGQGFIAKDLIRGDFEAALRNYLAQPSELDRT
EDAKVKAFWRENWGRWDARVPFEGTRKYHRILKSLREHPGDYLRAFLQIDASYRAMLLFT
YQSYLWNEGVRRYLQLLLPRENLFPMKYQAGTLLFHRDADPEVLHPLRESTFPLLAPDSH
FEDPKVKQAVDWVLGREKLSLSDLRVEEAPRMLYFKHEERPTIVVPHKLVIGRVQNDDLN
RGFLKVNIAFTLPPGAYATLVIKRLFHFAYQEESPQQIRDSWRTPVEDRDGATADTAYAP
RGPRRAPAPTPPLPDARPAARAARRSPAAGAAPTPGRRPQSREAVDTRPSQPSPSFRERQ
RQKKAAKEKARSEQAAKRPESRKKK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaatcaagcagaaacccgaggatttctccgtcaaggagtcctaccgcttcgacgag
gtggcgagcggtcgccaccgcgtctacctgatggacaagcagaagctgtccacctttgac
gcggcggaccgcatccgcgaggcgttcggtctcaagccgggctccatctcgtattgcgga
ttgaaggacaagcagggccgtaccgagcagctcatcgcggtggacggcgcggacgtggat
atgcaggaccccgacctgcgcctgaagtacctggggcgcacggacaagcccctgtcggcc
gccaacatcacctccaaccgcttcgccgtcaccgtgcgcatgctgacggaggcgtcgatc
ggccccctcaaccaggccgccgcggagatcaaccggctgggcgtggtgaactacttcgac
agccagcgcttcggctcgctcaagcacggccagggcttcatcgccaaggatctcatccgc
ggcgacttcgaggccgcgctgcgcaactacctggcccaaccctcggagctggaccggacc
gaggacgccaaggtgaaggccttctggcgcgagaactggggccggtgggacgcgcgcgtg
cccttcgagggcacccggaagtaccaccgcatcctcaaatccctgcgcgagcaccccggc
gactacctgcgcgccttcctgcagatcgacgcgtcctaccgcgcgatgctgctcttcacc
taccagagctacctgtggaacgagggcgtgcggcgctacctccagctgctgctgccgcgc
gagaacctcttccccatgaagtaccaggcgggcaccctgctcttccaccgcgacgcggac
cccgaggtgctccaccccctgcgcgagtccaccttccccctgctcgccccggacagccac
ttcgaggatccgaaggtgaagcaggccgtggactgggtgctcggccgggagaagctgtcc
ctgtcggacctccgcgtcgaggaggccccgcggatgctctacttcaagcacgaggagcgt
cccacgatcgtcgtcccccacaagctcgtcatcggccgcgtccagaacgacgacctgaac
cggggcttcctcaaggtcaacatcgccttcaccctgcccccgggtgcctacgccacgctc
gtcatcaagcggctcttccacttcgcctaccaggaggagagcccccagcagatccgcgac
tcctggcggacccccgtggaggaccgggacggagcgaccgcggacacggcctatgccccc
cgaggtccccggagggcccccgcgcccacgcctcccctccctgatgcccggccagccgcc
agggccgcccgccgctccccggccgcaggtgccgcccccaccccgggcaggcgtccccag
agccgcgaggcggtcgacacccgcccctcccagccctcgcccagcttccgcgagcgccag
cgccagaaaaaggccgccaaggaaaaggcgcgcagcgagcaggcggccaagcgcccggaa
tcacggaagaagaagtga
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