Archangium violaceum: JQX13_43420
Help
Entry
JQX13_43420 CDS
T07137
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
avm
Archangium violaceum
Pathway
avm00220
Arginine biosynthesis
avm00240
Pyrimidine metabolism
avm00250
Alanine, aspartate and glutamate metabolism
avm01100
Metabolic pathways
avm01110
Biosynthesis of secondary metabolites
avm01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JQX13_43420 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JQX13_43420 (carB)
00220 Arginine biosynthesis
JQX13_43420 (carB)
Enzymes [BR:
avm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
JQX13_43420 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
RimK
ATP-grasp_5
ATP-grasp_2
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
QRK06845
LinkDB
All DBs
Position
complement(10283065..10286292)
Genome browser
AA seq
1075 aa
AA seq
DB search
MPKRNDIRKVLVIGSGPIVIGQAVEFDYSGTQATKALREEGVEVVLLNSNPATVMTDPEF
AHRTYIEPITVEVAERIIAQERPDSILPTMGGQTALNLAKALAEQGILEKHGVRLIGASL
EAINKAEDRLLFKQAMERIGVALPKSGYATTMEQALALSDEIGFPAIIRPSFTLGGTGGG
IAYNREEYEAICRSGLKASPTSTILIEESVLGWKEYELEVVRDSADNVIIVCSIENLDPM
GVHTGDSITVAPAQTLTDREYQRLREASMRIIREIGVDTGGSNIQFGVNPRDGRIVVIEM
NPRVSRSSALASKATGYPIAKVAAKLALGYTLDELRNDITRDTPASFEPTLDYVVVKVPR
FNFEKFPHANRTLNTSMRAVGEVMAIGRTFREAYLKAMRSMESGRTGLESPELPEEKEER
RKVLRDYVRVPRPERPQYLVQAFREGMTVEDVHELSAIDPWFLRHIQALVHEARQLQEFG
TLDKVPDEVLRTAKADGFSDKYLAQLLGCTEADVRARRHAKGIRPVYKRVDTCAAEFEAY
TPYLYSTYEEEDEAPPTERQKVLILGSGPIRIGQGIEFDYCCVHAAFALRDAGYETVMVN
CNPETVSTDYDTSDRLYFEPLTIEDVLEVAQREKPVGAIVQFGGQTPLRLSVPLEKAGLP
ILGTSPDAIDRAEDRERFAQLIEKLGLKQPENGVARSHEEAYRVAERIGYPVMVRPSYVL
GGRAMEVVYDQQSLERYMREAVSASPEHPVLIDRFLKDAIEVDLDLVADKTGAVLVGGVL
EHVEEAGVHSGDAACTLPPHSLSPDLVERMKDQAMALAKELGVVGLMNVQFAIQGKTIYV
LEVNPRASRTVPFISKATGVALAKLASLCMVGKTLAELGATQEPEFRHVAVKESVFPFAR
FAGVDVILGPEMKSTGEVMGIADDFPSAFAKSQQAAGVKLPRSGKVFISVKNDDKPAVVD
LARRLRALGFTLVATSGTHQYLTTKGIQTEKVLKVTEGRPHIVDKIVDGQIVLVINSTFG
KQEIADSFSIRRESLMHGVPYYTTVQAARMAVGALEALLRKEQTVRPLQDYLAKK
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgaaatgacatccggaaggttctcgttatcggctcgggcccgatcgtcatc
gggcaggcggtcgagttcgactactctgggacgcaggccaccaaggcgctgcgcgaggag
ggcgtcgaagtcgtcctcttgaacagcaacccggcgacggtcatgaccgacccggagttc
gcgcaccgtacgtacatcgaacccatcacggtcgaggtcgccgagcgaatcatcgctcag
gagcgcccggactcgatcctgcccaccatgggtggccagacggcgctcaatctggccaag
gcgctcgcggagcagggcatcctcgagaagcacggcgtccggctcatcggcgcctcgctg
gaggccatcaacaaggccgaggaccggctgctcttcaagcaggccatggagcgcatcggc
gtggccctgcccaagagcggctacgccaccaccatggagcaggccctcgcgctgtccgac
gagatcggcttccccgccatcatccggccctccttcaccctgggcggcaccggcggcggc
atcgcctacaaccgcgaggagtacgaggccatctgccgctccggtctcaaggccagcccc
acctccaccatcctcatcgaggagagcgtcctcggctggaaggagtacgagctcgaggtg
gtccgcgactcggcggacaacgtcatcatcgtctgctccatcgagaacctggaccccatg
ggcgtgcacaccggtgactccatcaccgtggccccggcccagacgctcacggaccgcgag
taccagcggctgcgtgaggcctcgatgcgcatcatccgggagatcggcgtcgacacgggc
ggctcgaacatccagttcggcgtcaacccgcgcgacgggcgcatcgtggtcatcgagatg
aacccgcgcgtgtcgcgctccagcgcgctggcctcgaaggccacgggctaccccatcgcc
aaggtggccgcgaagctggccctgggctacacgctggacgagctgcgcaacgacatcacc
cgcgacaccccggcgtccttcgagcccacgctcgactacgtcgtggtgaaggtgccgcgc
ttcaacttcgagaagttcccccacgccaaccgcaccctcaacaccagcatgcgcgcggtg
ggcgaggtgatggccattggccgcaccttccgcgaggcctacctcaaggcgatgcgctcc
atggagtccggccgcacgggcctggagtcgcccgagctgcccgaggagaaggaggagcgg
cgcaaggtgctgcgcgactacgtgcgcgtgccccggccggagcggccgcagtacctggtg
caggccttccgcgagggcatgacggtggaggatgtccacgagctctccgccatcgatccc
tggttcctccgccacatccaggccctggtgcacgaggcgcggcagctccaggagttcggc
acgctggacaaggtgccggacgaggtgctgcgcacggccaaggcggatggcttctccgac
aagtacctggcgcagctgctgggctgcaccgaagccgacgtgcgcgcgcgccggcacgcc
aagggcatccggcccgtgtacaagcgggtggacacctgtgccgccgagttcgaggcctac
acgccgtacctgtactccacctacgaggaggaggacgaggcgccacccaccgagcgccag
aaggtgctcatcctgggcagcggccccatccggatcggccagggcatcgagttcgactac
tgctgcgtgcacgcggccttcgcgctgcgcgatgccgggtacgagacggtgatggtcaac
tgcaacccggagacggtgtccacggactacgacacgtcggaccgcctgtacttcgagccg
ctgaccatcgaggacgtgctggaggtggcgcagcgcgagaagccggtgggcgccatcgtc
cagttcggtgggcagacgccgctgcgcctgtccgtgccgctggagaaggccgggctgccg
attctgggcacgtcgccggacgccatcgaccgggccgaggaccgtgagcgcttcgcgcag
ctgatcgagaagctggggctgaagcagccggagaacggcgtggcgcgcagccacgaggag
gcctaccgcgtggccgagcgcatcggctatccggtgatggtgcggccctcgtacgtgctg
ggcggccgggcgatggaagtggtctacgaccagcagagcctggagcgctacatgcgcgag
gcggtgagcgcgtcgccggagcacccggtgctgatcgatcgcttcctcaaggacgccatc
gaggtggacctggacctggtggcggacaagacgggcgcggtgctggtgggcggggtgttg
gagcacgtggaggaggcgggtgtgcactcgggtgacgcggcgtgcacgctgccgccgcac
tcgctgtcgccggacctggtggagcgcatgaaggatcaggccatggccctggcgaaggag
ctgggcgtggtgggcctgatgaacgtgcagttcgccatccaggggaagacgatctacgtg
ctggaggtgaacccgcgcgcgagccgcacggtgccgttcatctcgaaggccacgggcgtg
gcgctggcgaagctggcgtcgctgtgcatggtgggcaagacgctggcggagctgggggcc
acgcaggagcccgagttccggcacgtggcggtgaaggagtccgtgttcccgttcgcgcgc
ttcgccggggtggacgtcatcctcgggcccgagatgaagtcgacgggcgaggtgatgggc
atcgcggatgacttcccgtcggccttcgccaagagccagcaggcggcgggcgtgaagctg
ccgaggagcggcaaggtcttcatctcggtgaagaacgacgacaagccggcggtggtggac
ctggcgcggcggctgcgggcgctgggcttcaccctggtggcgacgagcggcacgcaccag
tacctgacgacgaagggcatccagacggagaaggtgctgaaggtgaccgagggccgtccg
cacatcgtggacaagatcgtcgacgggcagatcgtgttggtgatcaactcgacgttcggc
aagcaggagatcgcggacagcttctccatccggcgcgagtcgctgatgcacggcgtgccg
tactacacgacggtgcaggcggcgcggatggcggtgggagcgctggaggcgctgctgcgc
aaggagcagacggtgcgtccgctccaggactacctggcgaagaagtag
DBGET
integrated database retrieval system
