Archangium violaceum: JQX13_45585
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Entry
JQX13_45585 CDS
T07137
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
avm
Archangium violaceum
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avm03021
]
JQX13_45585 (rpoH)
Transcription machinery [BR:
avm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JQX13_45585 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
Sigma70_r4_2
Fe_dep_repress
SieB
Put_DNA-bind_N
Motif
Other DBs
NCBI-ProteinID:
QRK07243
LinkDB
All DBs
Position
10796876..10797757
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AA seq
293 aa
AA seq
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MQATSSFSADTLSTYLSDINQYPLLTQPEEQALARRFRSGDLAAGHKLVTSNLRFVVKVA
YEYRSYGIKMSDLIQEANIGLMKAVQKFDPDKGIRLISYAVWWIRAYIQNYILKNWSLVK
LGTTQAQRRLFFSLARTRRELEKLGSGDGAIVDAEEIARKLNVKASEVREMEQRMGGRDL
SLDAPVGEEGDATHLDFVESESNSQVDEVADRQQAKMTRERIQQALMRLDPRERFIIEHR
VMGDAEMTLSELGEHFGFSRERARQLEIRAKDKLKAELASLMAEVGMDEASAL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccacctcttccttctccgccgataccctctccacgtacctctcggacatcaac
cagtacccgctgctcacgcagcccgaggagcaggctctcgcgcgtcgcttccgctcggga
gacctggcggcgggtcacaagttggtgacgagcaacctgcgcttcgtggtgaaggtcgcg
tacgagtaccgctcctacggcatcaagatgtccgacctcatccaggaggcgaacatcggc
ctgatgaaggcggtgcagaagttcgatccggacaagggcatccgcctcatctcctacgcg
gtgtggtggatccgcgcctacatccagaactacatcctgaagaactggagcctggtgaag
ctgggcaccacgcaggcccagcgccggctgttcttcagcctggcgcgcacgcggcgcgag
ctggagaagctcggctcgggcgacggcgccatcgtggacgcagaggagatcgcccggaag
ctgaacgtgaaggcctccgaggtgcgcgagatggagcagcgcatgggcgggcgggacttg
tcgctggacgcgcccgtgggcgaggagggtgacgccacgcacctggacttcgtggagtcg
gagtccaactcgcaggtggacgaggtcgccgaccggcagcaggcgaagatgacgcgcgag
cgcatccagcaggcgctgatgcggctggatccccgcgagcgcttcatcatcgagcaccgg
gtgatgggtgacgcggagatgaccctgagcgagctgggcgagcacttcggcttctcgcgc
gagcgcgcccgccagctggagatccgcgccaaggacaagctcaaggcggagctggcctcc
ctcatggccgaggtgggcatggacgaggcgtccgccctgtaa
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