Archangium violaceum: JQX13_47775
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Entry
JQX13_47775 CDS
T07137
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
avm
Archangium violaceum
Pathway
avm00260
Glycine, serine and threonine metabolism
avm00630
Glyoxylate and dicarboxylate metabolism
avm00670
One carbon pool by folate
avm00785
Lipoic acid metabolism
avm01100
Metabolic pathways
avm01110
Biosynthesis of secondary metabolites
avm01200
Carbon metabolism
Module
avm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JQX13_47775 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JQX13_47775 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JQX13_47775 (gcvP)
00670 One carbon pool by folate
JQX13_47775 (gcvP)
Enzymes [BR:
avm01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
JQX13_47775 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QRK07613
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All DBs
Position
complement(11296774..11299671)
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AA seq
965 aa
AA seq
DB search
MSLNWKYQESFADRHIGPDEKELQGMLKTLGVGSVDELIDQTVPAAIRSKEPLKMAAAWS
EHDALAVLESIAAKNQLFRSFIGMGYYDTQTPNVILRNILQNPGWYTQYTPYQAEIAQGR
LEALLNYQTMVMDLTGMEVANASLLDEGTAAAEAMALALHTQGEGSGGAFFVSDTCHPQT
LDVVRTRALPLGVEVVVGDHRTVDLSAKKYFGALVQYPATDGVVHDYRAFGEKVHAAGGL
FIVATDLLALTMLTPPGELGADVAVGSAQRFGVPMGYGGPHAAFFATKNAYTRVMPGRII
GVSEDAQGNRALRMALQTREQHIRREKATSNICTAQVLLAIMAGMYAVYHGPRGLKSIAE
RVHGLTMLLARGLTKLGYGANYENVFDTLRVEAPPPHIRGILSAAEAKGMNFRRIDERAV
GLSLDEATRPADVEAILSVFAGGKPLGFTLDELGKELQSTLPEGLRRTSPFLTHQVFNSY
HSETEMLRYIRRLESRDLSLTHSMIPLGSCTMKLNATAEMIPVTWPQFGKLHPFAPSSQA
AGYRVLFEQLEQMLASVTGFAGVSLQPNAGSQGELAGLLVIRAYQQHRGQGHRDVCLIPS
SAHGTNPASAVMAGYKVVVVKCDENGNIDVADLRARADEHKANLACLMVTYPSTHGVFEE
EIKEICAIVHERGGQVYMDGANLNAQVGLTKPAEIGADVCHINLHKTFCIPHGGGGPGMG
PICVASHLTKFLPGHPVITTGGNEGIGAISSAPWGSASILVISWMYIAMMGGEGLTRATK
TAILNANYIAERLQPHYPVLYRGKRGRVAHECIVDLRQLKKTAGVEVEDVAKRLMDYGFH
APTVSFPVAGTLMIEPTESESKAELDRLCDALIAIREEIREIEEGKAPRDNNVLKNAPHT
ARVITAPEWNRPYSREKAAFPAAWVVEHKFWPAVGRLNNVLGDRKLVCSCPPIEDYMSPE
PSKAA
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgaattggaaataccaggagtcgttcgccgaccgtcacatcgggccggatgag
aaggaactgcaggggatgctgaagaccctgggcgtgggctcggtcgacgagctcatcgac
cagacggtgcccgctgccatccgctcgaaggagccgctgaagatggcggcggcctggtcg
gagcacgacgcgctcgcggtgctggagtccatcgcggcgaagaaccagctgttccggtcc
ttcatcgggatgggctactacgacacccagaccccgaacgtcatcctgcgcaacatcctg
cagaacccgggctggtacacccagtacacgccctaccaggcggagatcgcccagggccgt
ctggaggcgctgctcaactaccagaccatggtgatggacctcacgggcatggaggtggcc
aacgcctccctgctcgacgagggcaccgcggccgccgaggccatggcgctggcgctgcac
acccagggtgaggggagcggaggcgccttcttcgtctcggacacctgccacccgcagacg
ctcgacgtggtccgcacccgcgctcttccgctgggcgtggaggtggtggtgggcgaccac
cgcacggtggacctgtccgcgaagaagtacttcggcgcgctggtgcagtacccggccacc
gatggcgtggtgcacgactaccgcgccttcggcgagaaggtgcacgcggccggtggcctc
ttcatcgtggccacggatctgctggcgctcacgatgctcaccccgccgggtgagctcggc
gcggacgtggcggtgggcagcgcccagcgcttcggcgtgcccatgggctacggcggtccg
cacgcggccttcttcgccacgaagaacgcctacacgcgcgtgatgccgggccgcatcatc
ggtgtgtccgaggacgcccagggcaaccgcgccctgcgcatggcgctgcagacgcgcgag
cagcacatccgccgcgagaaggccacgagcaacatctgcaccgcgcaggtgctgctggcc
atcatggccggcatgtacgcggtgtaccacgggccccgcggcctgaagtccatcgccgag
cgtgtgcacgggctcacgatgctgctggcgcgcggcctgacgaagctgggctacggcgcc
aactacgagaacgtgttcgacacgctccgggtcgaggctccgccgccgcacatccgggga
atcctctcggccgccgaggccaaggggatgaacttccgccgcatcgacgagcgggccgtc
ggcctgagcctcgacgaggccacgcgtccggccgacgtggaggccatcctctccgtgttc
gccggcggcaagcccctgggcttcacgctggacgagctgggcaaggagctccagagcacc
ctgcccgagggactgcggcgcaccagcccgttcctcacgcaccaggtcttcaacagctac
cactccgagacggagatgctgcggtacatccgccgcctcgagtcgcgtgatctgtcgctc
acgcactcgatgattccgctcgggtcgtgcaccatgaagctcaacgccaccgcggagatg
atccccgtgacgtggccgcagttcggcaagctgcacccgttcgcgccgagctcgcaggcg
gcgggctaccgcgtgctcttcgagcagctcgagcagatgctggcgagcgtgacgggcttc
gcgggcgtgtcgttgcagcccaacgcgggcagccagggtgagctggcgggcctgctcgtc
atccgcgcgtaccagcagcatcgcggccagggccaccgcgacgtgtgcctcatcccgtcg
tcggcgcacggcaccaacccggcctcggcggtgatggcgggctacaaggtcgtcgtcgtc
aagtgcgacgagaacggcaacatcgacgtggccgacctgcgcgccagggccgacgagcac
aaggcgaacctggcctgcttgatggtgacctacccgtccacacacggcgtgttcgaggag
gagatcaaggagatctgcgccatcgtccacgagcggggcggccaggtgtacatggacggg
gcgaacctcaacgcccaggtggggctgacgaagccggcggagatcggcgcggacgtctgc
cacatcaacctgcacaagacgttctgcatcccgcacggcggtggcggcccgggcatgggt
cccatctgcgtggccagccacctgacgaagttcctgccgggtcacccggtgatcaccacg
ggtggcaacgagggcatcggagcgatctcctcggctccgtggggcagcgccagcatcctg
gtcatctcgtggatgtacatcgcgatgatgggcggggaggggctgacccgggccacgaag
acggccatcctcaacgccaactacatcgccgagcggctgcagccgcactacccggtgctc
taccgcggcaagcggggcagggtggcgcacgagtgcatcgtggacctgcgccagctgaag
aagacggcgggcgtcgaggtggaggacgtggccaagcggttgatggactacggcttccac
gcgccgacggtgtcgttccccgtggcgggcacgctgatgatcgagcccacggagagcgag
tcgaaggcggagctggatcgtctgtgcgacgcgctgatcgccatccgtgaggagatccgc
gagatcgaggagggcaaggcgcccagggacaacaacgtcctgaagaacgcgccgcacacg
gcccgggtgatcaccgcgccggagtggaaccgtccgtactcgcgcgagaaggccgccttc
ccggcggcgtgggtggtggagcacaagttctggccggcggtgggccggctgaacaacgtg
ctgggcgatcgcaagctggtgtgctcgtgcccgccgatcgaggactacatgtcgccggag
ccgtcgaaggcggcgtaa
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