KEGG   Archangium violaceum: JQX13_48860
Entry
JQX13_48860       CDS       T07137                                 
Name
(GenBank) HD domain-containing protein
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
avm  Archangium violaceum
Brite
KEGG Orthology (KO) [BR:avm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:avm03019]
    JQX13_48860
Messenger RNA biogenesis [BR:avm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     JQX13_48860
SSDB
Motif
Pfam: HD tRNA_anti-codon TraI_2 RMI2
Other DBs
NCBI-ProteinID: QRK07806
LinkDB
Position
11582335..11583789
AA seq 484 aa
MTTDNQADNAPTSSPTDASVETVRKVYAKDLREKDSVNTVFRVTKKDRVTARSGKVFLSV
VLVDKSGEIDARVFDKVEALEPAFATGDYVLVRGNVIAFHGKVQVVIESLERLDPEPLDP
KEFEPPAAPAPAPAEQAPAPKAAAPAREPREERRNEEQAAPRTGGEGHGGARAVGQIREI
ITERVNDPHVKALLLAFLDDPQIAAGLPQAPAAKGVHHAYRGGLADHLLSVMRLTLRVAD
HYPMADRDLLLAGAFLHDVMKVAEISPEKGFEYTDEGKLVGHLVMTAQKIREKTLSLPNF
PPLLEQHLTHIVLSHHGRLEYGSPKLPVTIEAHIVHALDSLDSRIASWVEAMQRDPNDKW
TENLRLYERSLWKGPVPTARGRAPVEGGGRKKFKEKKPKERPEKTAGEAAPSQRPEKAER
QEKQREPRPPREPREPREAREPREPKPPREPVSVPKELTFKPFSVLTAKTEPANKPEGGS
DSEG
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgacgaccgacaatcaggccgacaacgcccccacttcctcccccactgatgcctccgtg
gagacggtgcgcaaggtgtacgcgaaggacctgcgcgagaaggactccgtcaacaccgtc
ttccgcgtcacgaagaaggaccgcgtcaccgcgcgcagcggcaaggtgttcctctccgtg
gtgctcgtcgacaagagcggagagatcgacgcccgcgtcttcgacaaggtcgaggccctc
gagcccgccttcgccaccggtgactacgtcctcgtccgtggcaatgtcatcgccttccac
ggcaaggtgcaggtggtcatcgagtccctcgagcggctggaccccgagccgttggatccc
aaggagttcgagcccccggcggcgcccgcccccgcccccgccgagcaggcccccgcgccc
aaggccgccgctcccgcccgcgagccccgtgaggagcgccggaacgaggagcaggccgcg
cccaggacgggtggcgagggccacggaggcgcccgcgccgtggggcagatccgtgaaatc
atcaccgagcgcgtgaacgatccccacgtgaaggcgctgctgctggccttcctggatgat
ccgcagatcgccgcgggcctcccgcaagcgccggccgccaagggcgtgcaccatgcctac
cgcggcggactggccgaccacctgctctccgtgatgcggctcaccctgcgcgtggcggac
cactaccccatggcggaccgtgacctgctgctcgccggcgccttcctccatgacgtgatg
aaggtcgcggagatctccccggagaagggcttcgagtacaccgacgagggcaagctggtg
ggccacctcgtcatgacggcgcagaagatccgcgagaagacgctctccctgcccaacttc
ccgcccctgctcgagcagcacctcacccacatcgtcctctcgcaccacgggcgtctggag
tacggctcgcccaagctgccggtgacgatcgaggcccatatcgtccacgcgctggactcg
ctggactcgcgcatcgcctcgtgggtggaggccatgcagcgcgaccccaacgacaagtgg
acggagaacctgcggctctacgagcgctcgctctggaagggccctgtgcccacggcgcgg
ggccgggcgcccgtggagggaggcggccgcaagaagttcaaggagaagaagcccaaggag
cggccggagaagaccgcgggcgaggcagcgccgtcgcagcggcccgagaaggccgagcgg
caggagaagcagcgcgagcccaggccgcctcgcgagcctcgggagcctcgcgaggcccgg
gagcctcgcgagcccaagccgccgcgcgagccggtgagcgtccccaaggagctgacgttc
aaacccttcagcgtgctgacggcgaagacggagcccgccaacaagcccgaggggggctct
gactcggaaggctga

DBGET integrated database retrieval system