Archangium violaceum: JQX13_50505
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Entry
JQX13_50505 CDS
T07137
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
avm
Archangium violaceum
Brite
KEGG Orthology (KO) [BR:
avm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avm03021
]
JQX13_50505
Transcription machinery [BR:
avm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JQX13_50505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
QRK08098
LinkDB
All DBs
Position
11969539..11970498
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AA seq
319 aa
AA seq
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MLSVPHFRPARLVRSSRSRRSHRGELTPDDRMLLEPWLAEVRRHPLLSREEEATLARRAR
RDGDAKARGRLVASNLRLVVKLAREHHRAPLLLMDLIQEGNLGLVIAVERFEPERGVRLC
TYAAWWIRAYLLRFIIENWRLVKLGTTDVQRKLFFRMREEEGRLLAAGQEATPRQLAARL
GVSEEDVVEMDQRLRHDEVRLDVSPEDDNGRPTPGRALPSGTPAVDEELGRRELTHWFQE
KVHSFAHELHDERERYILEHRLLAEEPETLRTIGQHFHVSRERARQVEAGLISSMREYLH
ERMPDFTWLGAEPGLHAPA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcggtcccccacttccgacccgcccgactggtgcggtcatcgcggtcccgccgc
tcccaccgcggggagctgacgcccgatgatcgcatgctgctcgagccgtggctggcggag
gtgaggcgccatcccctgctgtcccgggaggaggaagcgacgctcgcccggcgggcccgg
agggacggcgacgcgaaggctcgcggccggctggtggcctcgaacctccggctggtggtg
aagctggcacgcgagcaccaccgcgcccccctcctcctgatggacctcatccaggagggc
aacctcggcctcgtcatcgccgtggagcgcttcgaaccggagcgcggcgtgcggctgtgc
acctacgcggcctggtggatccgcgcctacctgctgcgcttcatcatcgagaactggcgg
ctggtgaagctggggaccacggacgtgcagcgcaagctcttcttccggatgagggaagaa
gagggccgcctgctcgccgcggggcaggaggcgaccccccggcaactggccgctcgcctg
ggcgtctccgaggaggacgtcgtcgagatggaccagcggctgcggcacgacgaggtccgg
ctcgatgtctcccccgaggacgacaacggccgccccactccgggacgtgcgctgccctcg
ggaacgcccgccgtggatgaggagctcggacgacgggagctcacgcactggttccaggaa
aaggtccactcgttcgcccacgagctgcacgacgagcgggagcgctacatcctggagcac
cggctgctggccgaggagcccgagacgttgcggaccatcggccaacacttccacgtcagc
cgcgagcgggcccgccaggtggaggcggggctgatctcgagcatgcgggagtacctgcac
gagcggatgccggacttcacgtggctgggcgcggagcccgggctgcatgcaccggcctga
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