Azotobacter vinelandii DJ: Avin_19830
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Entry
Avin_19830 CDS
T00885
Symbol
dnaX
Name
(GenBank) DNA-directed DNA polymerase III, gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
avn
Azotobacter vinelandii DJ
Pathway
avn03030
DNA replication
avn03430
Mismatch repair
avn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Avin_19830 (dnaX)
03430 Mismatch repair
Avin_19830 (dnaX)
03440 Homologous recombination
Avin_19830 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avn03032
]
Avin_19830 (dnaX)
03400 DNA repair and recombination proteins [BR:
avn03400
]
Avin_19830 (dnaX)
Enzymes [BR:
avn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Avin_19830 (dnaX)
DNA replication proteins [BR:
avn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Avin_19830 (dnaX)
DNA repair and recombination proteins [BR:
avn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Avin_19830 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
ResIII
AAA_14
AAA_30
AAA_18
AAA_19
AAA_2
PIF1
DUF3646
TsaE
nSTAND3
AAA_7
TraC-like
Rad17
zf-CXXC
SKI
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
ACO78191
UniProt:
C1DEK6
LinkDB
All DBs
Position
1970651..1972735
Genome browser
AA seq
694 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGISSSPCGQCSVCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFALKSMPP
ERVVEHLSHVLAAEGIPFETDALWLLGRAADGSMRDAMSLTDQAIAFGEGRVLAADVRAM
LGALDHGQVYGVLQALLEGDARALLEAVRQLAEQGPDWSAVLSEMLGVLHRVAIAQVLPE
AVDNGQGDRDRVLALAQTLPAEDVQFYYQMGLIGRRDLPLAPDSRGGFEMVLLRMLAFRP
ADVGKAPGRPLKDPGVRSATADSPADPVAGSGPEAAPAAPVSVSGERQAVVPPPIRAESA
EPASPPPVSGQPVGLPDLPWEESSQVADTPVAESAALPVGAMVAATVAGEAEQVLESAVS
NHPHGPSRSASVPETVVIPAVDREPERVPAPVVEVEEPSLADDDYYEVDAGEVDVDAYAY
LDVLTAEESLPSTPQPETEPAVAPATGLAAEWLELFQRLGLAGMTANIAANCTLAKTDGD
HWLLHLDPAQAALFNSTQQRRLNEALNQYHGRTLKLDIELRKPEQETPAQAAARRRAERQ
RQAEASIQGDPLVRQMIQQFAAVIRDGTIEPLNT
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgcaaatggcgtccccgctcgttccgagagatggttggc
cagacccatgtgctcaaggcgctgatcaacgccctcgatagtcagcgtttgcatcatgcc
tatctgttcaccggtactcgcggagtgggcaagaccaccatcgcgcggatcatcgccaag
tgcctgaattgcgagaccggtatcagttccagcccttgcgggcagtgttcggtctgccgg
gaaatcgacgaggggcgtttcgtcgacctcatcgaggtcgatgccgccagccgtaccaag
gtggaagatacccgcgaactgctcgataacgtgcagtacgcaccgacgcgtgggcgcttc
aaggtctatctgatcgacgaagtgcacatgctttccagccattccttcaacgcgctgctg
aagaccctcgaggagccgccgccccacgtcaagttcctgctggctaccaccgatccgcag
aagctgccggtcaccatcctgtcgcgctgcctgcagttcgccctgaagagcatgccgccg
gagcgggtggtagagcatctgagccacgtactcgctgcggagggcattcccttcgagacg
gatgccctctggttgctcgggcgggctgcggacggctcgatgcgcgatgccatgagcctg
accgaccaggccatcgctttcggcgagggcagggtgctcgccgccgatgtgcgggcgatg
ctcggggccctcgatcacggccaggtctatggtgtgctgcaggcgttgctggagggcgac
gcccgggccttgctcgaggcggtgcgccaactggccgagcagggaccggactggagcgct
gtgctgtcggagatgcttggcgtactgcatcgggtggccatcgcccaggtattgcccgag
gccgtggacaatggccagggcgaccgcgatcgggtgctggcgctcgcgcagacgctgcca
gccgaagatgtgcagttctactatcagatgggtttgatcggccgtcgcgacctgccgctg
gcgccggactcgcgtggtggcttcgagatggtgctgctgcgcatgctggcgtttcgtccg
gcggatgtcggcaaggcgccgggcaggccgctaaaggatccgggagtccgctcggccacg
gctgattcccccgccgatcccgtggccggcagcggtcccgaagcggcgcccgctgctccc
gtctccgtatcgggagagcgccaggccgtggttcctccaccgatacgtgccgaatcggcc
gaacccgcatcgccgccgccggtatccggtcagcctgtcggacttcccgatctgccctgg
gaggagtcctcgcaggtagccgacactcccgtcgcggagtcggctgcgctgccggtcggc
gccatggttgctgcgaccgtggccggcgaggcggaacaggtgctcgaaagtgccgtatcg
aaccatccgcatggcccgtctcgctccgcttcggtgccggaaacggtcgtgatcccggcc
gtcgatcgcgagccggaaagggtgcctgcgcccgttgtggaggtggaggagccttctctg
gcggacgatgactattatgaagtggatgctggcgaggtggatgtcgacgcctatgcctat
ctcgatgtcctgactgccgaagagtcgctcccgtcgacgccgcagcctgaaaccgaaccg
gcggtggcgccggctaccggcctcgccgccgaatggctcgaactttttcagcgattgggg
ctggccgggatgaccgccaacattgcggccaactgtaccttggcgaagaccgatggcgat
cactggctgttgcatctggacccggcgcaggccgcgctgttcaacagtacccagcagcgg
cgtctgaacgaggccctgaaccagtatcatggccgtacgctcaagctggatatcgaattg
cgcaagccggagcaggagactccggctcaggcggccgcccggcggagggccgaacgccag
cgccaggccgaagcgtccattcagggcgatcccctggtccggcagatgattcaacagttc
gccgcggtgattcgcgacggcaccatcgaacccctgaatacctga
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