Azotobacter vinelandii DJ: Avin_26340
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Entry
Avin_26340 CDS
T00885
Name
(GenBank) cyclic di-GMP signal transduction protein
Organism
avn
Azotobacter vinelandii DJ
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
PAS_8
PAS_3
dCache_1
Tubulin_3
Motif
Other DBs
NCBI-ProteinID:
ACO78810
UniProt:
C1DJP1
LinkDB
All DBs
Position
2690546..2693860
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AA seq
1104 aa
AA seq
DB search
MACNPDIEGIIHAQDVRERLAPSFTRALVSNVAVLVVALGLALLVAMAWQGTASSEEAAR
QEIAETLNRTLGRLRILVRAAEMTAESAERGVRTLGASGAMLRPTLENSLAAFEQRPELS
YLGIVQPETGEYGNLERTATGEILLWLFPGNRPTDPAVRNFILTDEGFVPHRTYPANGYD
PRRRPFYQAASNGPAEGTWMPAYRWIVHFSDDSEPPLWGLSYAKALRDEAGKLVSVLDTD
FDIPALNGFLKSLATEYHSRLHVVELGATPRLIGGPDVGREPLPLPAELASLSGFSGDAF
VDRMELEGEQRWVGARRLDLKGGISWLVVASRTAPFIEAPLRHQLFQVLGMGLAIALGLV
LVSVRTARRFGRPLAELERRVTGIGLHDLNASATSPLSSADDFRETQLLGKALDRMAAAV
RQQVRAKEQQVASLALKGALFDFSSAAIFSLDRQLKVIEWNAAAERLFGQERDGVLGRAA
GEVVTAPNGPADWAAILGSTATGTFQFLGAHGPFDAELRFVTFTQEEREIHTFVLNDISE
RKHTERQLRQERDYADAVLNSLPGVFYHYDENVRLRRWNRNLERITGYKSEELAGVEPTI
FFADEDKALVASRIGEVFEKGESSVEADYLLKDGQRIPYLFTGVRFEYDGRRGFVGVGYD
ISERKRAEQRIRHLAMHDGLTDLPNRNLIQERIEQAIVRARRGGRLLALLYLDLDRFKVL
NDGYGHLFGDAVLKTASERLLKLVREGDTVARLGGDEFLILLADLEQPADADAVARKIVG
SLDCPIVVQERKIHLSGSIGVSLFPRDGETADELIDNADMAMYRAKELGRNTYQFFTRAM
SLETQRRVDLEIKLRGAATAGQLQLVYQPKVSLENGGISGCEALLRWHHPELGIVSPEHF
IPIAEDSGLIVPIGDWVLRTACMQARAWMDAGLPPVCVAVNVSTRQFLQQDVVAWVTRTL
RETGLPAARLELELTESLIARDIEKVTATIDQLKDIGVKLSIDDFGTGYSSLNYLKRFRV
DTLKIDQSFVRNMLTEMEDETIVLAVIALAHNLKFKVIAEGVETEQHSRFLCSNGCDEIQ
GHYFSEPVTAEAFETMLRAGKHLS
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcatgcaacccagacatcgaaggcatcatccatgcgcaggacgttcgggaacggctg
gcgccttcgttcacccgagccctggtctccaatgtcgccgttctggtcgtcgcgctcgga
ctggccttgctagtcgcgatggcctggcagggcaccgccagtagcgaggaggcggcacga
caggaaatcgccgaaacgctcaaccggacgctgggacgtttgcggattctggtccgtgcc
gccgagatgacggcggaatcggccgaacgcggtgtacgtacgctcggtgcgagcggggcc
atgctgcgcccgaccctggaaaattcgctggccgcgttcgaacagcgcccggaactgagt
tatctcggcatcgtccagcccgagacgggcgaatacgggaacctggagcggaccgccacg
ggagagatcctcctctggctgtttcccggaaatcgccccaccgacccggccgtacgcaat
ttcatcctgaccgacgaaggcttcgtcccccatcggacctaccccgccaacggctatgac
ccgcgccgccgaccgttctaccaggcggcgtcgaacggcccggccgagggcacctggatg
ccggcatatcggtggatcgtccatttctcggacgacagcgagccgcctctctggggactc
agttacgcgaaggcgcttcgtgacgaggccggcaagttggtgagcgtactcgataccgac
ttcgacataccggccctgaacggtttcctgaaatccctcgccacggaatatcactcccgg
ctccatgtcgtggaactgggggcgacgccccgcctgatcggcggtcccgatgtcggccgg
gagccgcttccacttcccgcggaactcgcttcgctgagcggattttccggcgatgctttc
gtcgatcggatggagctggaaggcgagcagcgatgggtcggtgcgcggcgcctggatctc
aagggcggcatttcgtggctggtcgtcgcctcgcgcacggcgcccttcatcgaggccccg
ctgcgtcaccagttgttccaggtgctgggcatgggtctggcgatcgcgctgggcctggtg
ctggtttcggtccgcaccgcccgccgtttcggcaggccgctcgccgaactggagcggcgt
gtcaccggcatcgggctgcatgacttgaacgcctcggcgacgagccccctgtcctccgcg
gacgactttcgggaaacccagctcctgggcaaggccctcgaccgcatggccgcggccgtc
cggcagcaggtccgggccaaggagcagcaagtggcctcgctcgccctgaaaggggccctt
ttcgatttttcctccgcggcgatcttcagcctcgaccgccaactgaaggtcatcgaatgg
aatgccgccgcggaacgcctgttcggccaggagcgggacggggtgctcggccgggccgct
ggcgaagtggtgacggctccgaacgggcccgccgactgggcggcgatcctgggctcgacg
gctaccggcacgttccaattcctcggcgcgcatggcccgttcgacgcggaactgcgattc
gtgaccttcacgcaggaagagcgcgagatccacaccttcgttctcaacgatatctcggaa
cgcaaacacaccgagcggcagttgcggcaggagcgcgactacgccgacgcggtgctcaac
agcctgccgggcgtcttctatcactacgacgaaaacgtgcgcctgaggcgctggaacagg
aacctcgaacggatcaccggctataaatccgaagaactcgcgggagtcgagccgacgatc
tttttcgccgacgaggacaaggcgctggtcgcgagccggatcggcgaagtcttcgagaag
ggagaatcctcggtcgaggcggattacctgctcaaggatggccaacggattccctacctg
ttcaccggcgtgcgcttcgagtacgacggtcggcgcggtttcgtcggcgtcggctacgac
atcagcgaacgcaagcgcgccgaacagcgtatccgccacctcgctatgcacgacggcctc
accgacctgccgaaccgcaacctgatccaggagcgcatcgaacaggcgatcgtccgggcg
cgccgtggcggccgcctgctcgcattgctctatctcgacctggatcgcttcaaggttctc
aacgacggctacggccatttgttcggcgacgccgtactgaagaccgccagcgaacggctg
ctcaagctggtgcgcgaaggcgataccgtggcccgcctcggcggcgacgagttcctgatc
ctgctggccgacctggagcagccggccgacgccgatgccgtcgcccgcaagatcgtcggg
agcctcgattgcccgatcgtcgtgcaggagcgaaaaatccacctgtccggcagtatcggc
gtgagcctgttcccccgcgacggcgaaaccgccgacgagctgatcgacaacgccgacatg
gcgatgtaccgggccaaggaactgggccgcaacacctaccagttcttcacgcgcgccatg
agcctggagacgcagcgccgcgtcgacctggaaatcaagctgcgcggcgcggcgacggca
ggacaactgcaactcgtctaccagcccaaggtgagcctggaaaatggcggcatcagcggc
tgcgaggcgctgctgcgctggcatcatcccgagctgggcatcgtatctcccgagcacttc
attccgatcgcggaggactccggcctgatcgtgccgatcggcgactgggtgctgcgcacc
gcctgcatgcaagccagggcctggatggatgccggcttgccgcccgtctgcgttgcggtg
aacgtctccacgcgccagttcctgcagcaggatgtggtcgcctgggtgacgcgcacgctc
cgggagacaggcctgccagccgcccggctggaactcgaactcaccgaaagcctgatcgcc
cgggatatcgagaaggtgaccgcgaccatcgaccagctcaaggacatcggcgtgaaactg
tccatcgacgatttcggcaccggctattcgagcctcaactacctgaaacgcttccgcgtc
gatacgctgaaaatcgatcagtccttcgtgcgtaacatgctgaccgaaatggaggacgag
accatcgtgctggcggtcatcgccctcgcccacaacctcaagttcaaggtgatcgccgag
ggcgtggaaaccgaacagcacagccgtttcctgtgttcgaacggctgcgacgagatccag
ggccattatttcagcgaacccgtgacggccgaggcgttcgagacgatgctgcgcgccggc
aagcacttgtcctga
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integrated database retrieval system
