Azotobacter vinelandii DJ: Avin_31410
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Entry
Avin_31410 CDS
T00885
Name
(GenBank) sigma54-dependent activator protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
avn
Azotobacter vinelandii DJ
Brite
KEGG Orthology (KO) [BR:
avn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avn03000
]
Avin_31410
Transcription factors [BR:
avn03000
]
Prokaryotic type
Helix-turn-helix
Other families
Avin_31410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
Mg_chelatase
HTH_50
PAS_8
AAA
PAS_4
AAA_2
MCM
IclR_C
PAS_7
PAS
HTH_30
AAA_3
ATPase
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
ACO79304
UniProt:
C1DNV1
LinkDB
All DBs
Position
complement(3247329..3249332)
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AA seq
667 aa
AA seq
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MPVTRLETACPREDLDYIASIGSVDLSEGPVPEVEQAWRACLDGRHERPAGVRPVIWDSW
RRCVRAGLEPDGFEYRFVDAAVLAEKLKSNRLLIETAAEVMQGLLAYNPRGHINLTDAEG
VTLHFCGLDITPVGSVLLESLQGTNCTGLAIAENRLVYVLSEENFGTWLRQRRMHCAAAP
IRDLGGRTLAILTLTAEPGRFHFHTLGTVQAAAEAVSRQMALQALLEEQRTLLEVLNEGL
VVLDERGCIKALNRYARQLFRVERDLLGAPFHRLGRGERVDSLLLRADEGLHDLDITLQL
HDGTHLSCLASVCPTERGGRIVSLRENRRIREITRRIIGTQASYTFETILGGSRAMQDTL
RLARIASRGDSTTLILGESGTGKELFAQAIHNASERCGGPFVAVNCGAIPRDLVQSELFG
YIEGAFTGSARGGSAGKFELADGGTIFLDEIGDMPFDAQASLLRVLQEGEVTRVGAKRSQ
PVDVRIVAATNRNLSRAVADGSFREDLYYRLNVLSLSVPPLRMRREDIPTLAQHFLERCA
RSLRKPVRGIVREALDILMAHAWPGNVRELENTIERAANLAGGELIEAEDLPLELAQVAR
RAAEPAVRCGAAMDLGSHEMNAIAAALRECRGNVRLAAKRLGVSRGGLYNKMNRYGLSAD
AFRSGRG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcacacgactagaaacggcctgcccccgggaagacctcgactacatcgcctcc
atcggttcggttgatctgagcgaggggcctgttcccgaggtcgagcaggcctggcgggcc
tgcctggacgggcggcacgagcggccggccggggtcaggccggtcatctgggactcctgg
cggcgctgcgtgcgggccgggctcgagcccgacggcttcgagtaccgtttcgtcgacgcc
gccgtattggccgagaagctgaaaagcaaccgcctgctgatcgagaccgccgcggaagtc
atgcaggggctgctcgcttacaaccccaggggacacataaacctgaccgacgccgagggc
gtcacgctgcacttctgcggtctggacatcaccccggtgggcagcgtgctcctggaatcg
ctgcagggaaccaactgcaccgggctggccatcgcggaaaaccgcctggtgtacgtgctg
tcggaggagaatttcgggacctggctgcgccagcgccgcatgcactgcgccgccgcgccg
atccgcgatctcggcggacgcaccctggcgatcctgaccctcacggcggaacccggccgg
ttccactttcacaccctggggaccgtccaggcggcggccgaggcggtttcccggcagatg
gccctgcaagctttgctggaagagcagcggacgctgctcgaagtgctcaacgaaggtctc
gtcgtgctcgacgagcggggctgcatcaaggccctcaaccgctatgcccggcaactgttc
cgggtggagcgcgacctgctcggcgcgccgttccaccgcctgggccgcggcgaacgggtg
gacagcctgctgctgcgggcggacgagggcctgcacgacctggacatcaccctccagctc
catgacggcacgcacctgtcatgcctggcttccgtctgccccacggagcggggcgggcgg
atcgtctccctgcgggaaaaccggcgcatccgcgaaatcacccggcgcatcatcggcacc
caggccagctacaccttcgagaccatcctgggcggctcgcgggccatgcaggacaccctg
cggctggcgcggatcgccagccggggcgactcgaccaccctgatcctgggagaaagcggc
accggcaaggagctgttcgcccaggccatccacaacgccagcgagcgttgcggcggcccc
ttcgtggcggtcaactgcggggccatcccgcgcgacctggtgcagagcgaactgttcggc
tacatcgagggcgccttcaccggctcggcgcgaggcggttcggccgggaagttcgagctg
gccgacggcggcaccatcttcctggacgagatcggcgacatgcccttcgacgcccaggcc
agcctgctgcgggtcttgcaggagggcgaggtcacccgggtcggggcgaagcgctcgcag
ccggtggatgtgcgcatcgtcgcggcgaccaaccgcaacctgagccgggccgtcgccgac
ggcagcttccgggaggacctctattaccggctcaacgtgctcagcctcagcgtcccgccg
ctgcggatgcgccgggaggatattccgaccctggcgcagcacttcctcgaacgctgcgcc
cggtcgctgcgcaagcccgtgcggggcatcgtccgggaggcgctggacatcctcatggcc
catgcctggccgggcaatgtccgcgaactggaaaacaccatcgagcgggccgccaacctg
gccggcggcgaactgatcgaggcggaggacctgcccctcgaacttgcccaggtcgcacgc
cgggcggcggagccggcggtgcgctgcggggcggccatggacctgggcagccatgaaatg
aacgccatagccgcggccctgcgggagtgccggggcaacgttcgcctggccgcgaagcgg
ctcggcgtctcgcggggcgggctgtacaacaagatgaaccgttacggcctgagcgccgac
gccttccgctcgggacggggctga
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