Azotobacter vinelandii DJ: Avin_34220
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Entry
Avin_34220 CDS
T00885
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
avn
Azotobacter vinelandii DJ
Brite
KEGG Orthology (KO) [BR:
avn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avn03016
]
Avin_34220 (truA)
Enzymes [BR:
avn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Avin_34220 (truA)
Transfer RNA biogenesis [BR:
avn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Avin_34220 (truA)
Prokaryotic type
Avin_34220 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ACO79571
UniProt:
C1DQD5
LinkDB
All DBs
Position
complement(3493793..3494659)
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AA seq
288 aa
AA seq
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MSEENVSTAAAEVAAAGFCRVALGLEYRGARYHGFQRQNPRVASIQAALESALSRVAGGV
PLNVVCAGRTDALVHASGQVVHFDTPIERSMHAWTMGANMNLPADISVAWAREMPAHFHA
RFSATARRYRYVIYNDPIRPAHMAEEVTWNHRPLDIERMRQAARPLVGCHDFSAFRASQC
QARSPIKTVHHLQLIRHGRLIVLDIRANAFLHHMVRNIAGVLMTIGAGERPVEWAREVLE
GRQRHKGGVTAHPYGLYLVQVDYPQEFELPQRYLGPHFLSGLPDCRLG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaacgtatcgaccgcggcagccgaagtggctgccgctggcttttgcagg
gtagccctgggactcgagtatcggggcgcccgttaccatggtttccagcgccagaacccc
agggtggcctcgatccaggcggcgctcgagtcggccctgtccagggtcgccggcggcgtt
ccattgaacgtggtgtgtgcgggacgcaccgacgccctggtgcatgccagcggtcaggtg
gtgcatttcgataccccgatcgagcgcagcatgcatgcctggaccatgggggccaacatg
aacctgcccgcggacatcagtgtggcctgggcccgggaaatgccggcgcatttccatgcg
cgcttcagtgcgacggcccggcgttaccgttatgtcatctacaacgacccgatccgcccg
gcacacatggccgaggaggtcacctggaaccaccggccgctcgatatcgagcgtatgcgc
caggctgcccggccgctggtcggctgccatgatttcagtgcctttcgcgccagccagtgc
caggccaggtcgccgatcaagacggttcaccatcttcaactgatccggcacggtcgtttg
atcgtgctggacattcgggccaatgcctttctgcatcacatggtgcgcaacatcgccggt
gtgctgatgaccataggggcgggcgagcgtcccgtcgaatgggcgcgggaagtgctggag
ggccgtcagcgtcacaagggcggggtgacggcgcatccctatggcttgtatctggtgcag
gtcgattatccgcaagagttcgagctgccgcagcgctacctgggaccgcactttctgtcg
ggtctgccggattgccggctaggttga
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