Azotobacter vinelandii DJ: Avin_42560
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Entry
Avin_42560 CDS
T00885
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
avn
Azotobacter vinelandii DJ
Pathway
avn00550
Peptidoglycan biosynthesis
avn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Avin_42560 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
avn01003
]
Avin_42560 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avn01011
]
Avin_42560 (mrcB)
Enzymes [BR:
avn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Avin_42560 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Avin_42560 (mrcB)
Glycosyltransferases [BR:
avn01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Avin_42560 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
avn01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Avin_42560 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
ACO80379
UniProt:
C1DFI3
LinkDB
All DBs
Position
complement(4287577..4289919)
Genome browser
AA seq
780 aa
AA seq
DB search
MTRTRSPKSPPPRRSAVLRSWLGWSAKLALVGLVVLAGFAVYFDAVIQEKFSGKRWTLPA
KVYARPLELFSGLKLSKQDFLTELDALGYRREAVAGPGSAFVSGNTVELHSRGFRFYEGD
EPARRIRVRFSGDSVASLSDAAGKDLAVVRMEPPLIGGLYPSHNEDRILVQRNELPPYLV
ETLVAVEDREFFSHFGVSPKSIARALWVNATAGGVVQGGSTLTQQLVKNFYLNNERSLVR
KATEAMMAVLLELHYDKDEILEAYLNEVFLGQDGNRAVHGFGLASQYFFGQPLAELQPHQ
IALLVGMVKGPTYYNPRRNPERALVRRNLVIDLMVGQGVIDAAQAEAAKQKPLGVTARGS
MADSSYPAFLDLVKRQLREDYQEADLTEEGLRIFTSLDPILQSKAEAAVRNTFKRIGKGG
DPVEASMVVSNPETGEVLALLGSRQPRFAGFNRALDAVRPIGSLIKPAVYLTALERPNQY
TLTSWLADVPFSVKGQDGQLWRPQNYDHRAHGDIYLYQGLANSYNLSTAKLGLELGVPNV
LKTLARLGVNREWPAYPSMLLGAGALTPMEVSSMYLTIASGGFNTPLRGIRSVLTADGEP
LKRYPFQIQQRFDPGAIYLLQNAMQRVMREGTGRSVYSQLPRSLTLAGKTGTTNDSRDSW
FAGFSQDLLAVVWLGRDDNGKTPLTGATGALRVWTDFMAKADPLPLDMPMPDNVTLAWVN
ARNGLGSEQGCPDAVQMPYIRGSEPPPGPACGLPQAPEGNVQDVIENVQDVMDWVRGWSN
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgacacgtacccgctcccccaaatcaccccctccccgtcgctccgctgtccttcgttcc
tggctgggctggagcgccaagcttgccctggtcggtctggtggtgctggccggctttgcc
gtctacttcgatgccgtgatacaggagaaattctccggcaagcgctggacgctgccggcc
aaggtctacgcgcggccgctggagctgttctccggtctcaagctgtcgaagcaggatttt
ctcaccgagctggatgcgctcggctatcgccgcgaggccgtcgccgggccggggtcggcc
ttcgtatccggcaacaccgtcgaactgcatagccggggctttcgcttctatgagggcgac
gagccggcacggaggatccgtgtacgcttctccggcgactccgtggccagcctgagcgat
gccgccggcaaggacctggccgtcgtgcggatggagccgccgctgatcggcggcctgtac
ccgtcgcacaacgaggaccgcatcctggtccagcgcaacgaactgccgccctacctggtg
gaaaccctggtggcggtggaggatcgcgagttcttcagccacttcggggtgtcgccgaaa
tccatcgctcgcgccctgtgggtcaacgccacggcaggcggggtggttcagggcggcagc
acgctgacccagcagttggtgaagaacttctacctgaacaacgagcgcagcctggtgcgc
aaggccactgaagccatgatggccgtgctgctggagctgcactacgacaaggacgagatt
ctcgaggcctatctcaacgaggtgttcctggggcaggacggcaatcgcgcggtgcacggc
ttcggtctggccagccagtatttcttcggccagccgctggccgagttgcagccgcatcag
atcgccctgctggtgggcatggtcaaggggcccacctactacaatccacgccgcaacccc
gagcgagccctggtgcggcgcaacctggtcatcgacctcatggtcgggcagggggtgatc
gatgcggcgcaagccgaagccgccaagcagaagccgctcggcgtcaccgcccgcggcagc
atggccgacagttcctatccggcgtttctcgatcttgtcaagcgccagttgcgcgaggac
taccaggaggccgacctcaccgaggaggggctgcgcatcttcaccagcctggatccgatc
ctgcagagcaaggccgaggctgcggtacgaaataccttcaagcgcatcggcaagggcggt
gatccggtcgaggcgtcgatggtggtgagcaatccggaaaccggcgaagtgctggccctg
ctcggcagccggcagccgcgtttcgccggtttcaaccgggcgctggacgcggtgcggccg
atcggttcgctgatcaagccggccgtctacctcaccgcgctggagcggcccaaccagtac
accctgaccagttggctggccgatgtgcctttctcggtgaagggccaggacggccagctc
tggcgcccgcagaactacgaccatcgggcccatggcgacatctatctttatcaggggctg
gccaattcctacaacctgtcgaccgccaagctcggcctcgagttgggcgtgccgaacgtg
ctgaaaacattggcgcgtctgggcgtcaatcgcgaatggccggcctatccgtcgatgttg
ctgggcgctggggccttgaccccgatggaggtgtccagcatgtacctgaccatcgccagt
ggcggattcaatacgccgttgcgcggtatccgcagtgtcctgaccgccgacggcgaaccg
ctcaagcgttatccgttccagatccagcagcgtttcgatccaggggccatctatctgttg
cagaacgccatgcaacgggtgatgcgcgaggggaccggccgttcggtctacagccagttg
ccgcgctcgctgacgctggccggcaagaccggtaccaccaacgattcgcgcgacagttgg
ttcgccggcttcagccaggatctgctggcggtggtctggctgggacgtgacgacaacggc
aagaccccgctgaccggtgccaccggggcactgagggtctggacggacttcatggccaag
gccgatccactgccgctggatatgccgatgccggacaatgtcaccctggcttgggtgaat
gcgcgcaacggactgggttccgagcagggctgtccggatgcggtgcagatgccctatatc
cggggcagcgagccgccaccggggcccgcttgcggcctgccgcaggctccggagggcaat
gtgcaggatgtgatcgagaatgttcaggatgtcatggattgggtgcgtggctggtcgaat
tga
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