Azotobacter vinelandii DJ: Avin_42690
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Entry
Avin_42690 CDS
T00885
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase; PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
avn
Azotobacter vinelandii DJ
Pathway
avn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Avin_42690 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avn03019
]
Avin_42690 (pcnB)
Enzymes [BR:
avn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Avin_42690 (pcnB)
Messenger RNA biogenesis [BR:
avn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Avin_42690 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
DUF6932
Motif
Other DBs
NCBI-ProteinID:
ACO80392
UniProt:
C1DFJ6
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All DBs
Position
4303776..4305167
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AA seq
463 aa
AA seq
DB search
MLKKLFKSFRLSLNRPHPRSTPEVLGSQQHSLRRADISRHAVSVVERLQNAGYQAYVVGG
CVRDLLLDIEPKDFDVATSATPEQVRAEFRNARVIGRRFKLAHVHFGREIIEVATFRAHH
PDDEEDDEDNHLAMRHESGRILRDNVYGTLEEDAQRRDFTINALYFDIAHDRILDYAHGV
HDIRNHLVRLIGDPEQRYLEDPVRMLRAVRFAAKLDFDIEHHSAAPIRRLAPLLRDIPAP
RLFDEVLKLFLSGYAEDTFELLLEYDLFAPLFPATAAALERNPDYVGRLVRHALANTDER
IAQGKPVTPAFLFAALLWPALPSRALELQKRGMPPIPALQEAAHLVLTEQCRRTAIPKRF
TLPAREIWDLQERLPRRQGKRADLLLEHPRFRAGYDFLLLREEAGEQTGGLGDWWTDYQE
ASDSERRSMIRALGGKDEAGSAPRKRRRPNRRRRGSGDVPERD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgttcaagtcctttcgcctgtccctgaaccgcccccatccgcgcagc
acgccggaggtccttggcagccagcagcattcgctgcgccgcgccgacatcagccgccat
gccgtcagcgtggtggaacgtctgcaaaatgccggctaccaggcctacgtcgtcggcggt
tgcgtccgagacctgctgctcgacatcgagccgaaggacttcgatgtcgccaccagcgcc
acgcccgaacaggtccgcgccgagttccgcaatgcacgggtgatcggccgccgcttcaag
ctggcccatgtacatttcggccgggaaatcatcgaagtcgccaccttccgcgcccaccat
ccggacgacgaggaagacgacgaggacaaccatctggcgatgcgccatgaaagcggccgg
attctgcgcgacaacgtctacggcaccctggaagaagacgcccagcgccgcgacttcacc
atcaacgccctgtatttcgacatcgcccacgatcgcatcctcgattacgcccatggcgtg
cacgacatccgcaaccatctggttcgcctgatcggcgatcccgagcagcgttacctggag
gacccggtgcgcatgctgcgcgccgtgcgcttcgccgccaagctcgacttcgacatcgag
catcacagcgccgcaccgatccgccggctcgcaccgttgttgcgcgacattcccgccccc
cgcctgttcgacgaggtgctcaagctgttcctctcgggttacgccgaagacaccttcgag
ctgctgctcgaatacgacctgttcgccccgctgttccccgccacggccgcggccctggag
cgcaacccggattatgtcggacggctggtccgccatgccctggccaataccgacgagcgc
atcgcccagggcaagccggtgactcccgccttcctgttcgccgccctgctctggccggcc
ctgccatcccgagccctggagctgcagaagcgcggcatgccgccgatcccggcattgcag
gaggcggcccatctggtgctcaccgaacagtgccggcgcaccgcgattcccaagcgtttc
accctgcccgcccgggaaatctgggacctgcaggaacgcctgccgcgccgccagggcaag
cgcgccgacctgctgctcgagcatccgcgcttccgtgccggctacgacttcctgctgctg
cgcgaggaggccggcgagcagaccggcggtctgggcgactggtggaccgactaccaggag
gccagcgacagcgaaagacgcagcatgatccgcgccctcggcggcaaggacgaagccggc
agcgctccgcgcaagcgccgccgccccaaccggcgccggcgcggctcgggcgatgtgccg
gagcgggattga
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