Aeromonas veronii TH0426: AMS64_01475
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Entry
AMS64_01475 CDS
T04529
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
avo
Aeromonas veronii TH0426
Pathway
avo03420
Nucleotide excision repair
avo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMS64_01475 (uvrD)
03430 Mismatch repair
AMS64_01475 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avo03400
]
AMS64_01475 (uvrD)
Enzymes [BR:
avo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMS64_01475 (uvrD)
DNA repair and recombination proteins [BR:
avo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMS64_01475 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AMS64_01475 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AMQ41156
LinkDB
All DBs
Position
complement(322895..325066)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSTLLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMQVERCSPFSIIAV
TFTNKAAAEMRGRVEKVIGDGVRGMWIGTFHGIAHRLLRAHHLDAGLPQDFQILDSDDQY
RLIRRVLKALNLDEKHWAPRAVMGYINGKKDEGLRPGDIDLYGDPVTRTYQQIYKTYQET
CDRSGLVDFAELLLRAHELWLNKPHILEHYRDRFQNILVDEFQDTNGIQYAWLRMLAGNS
GKVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAETIRLEQNYRSTANILKAANSVIANN
AERLGKELWTEGAEGEPISLYAAFNEVDEARFVVGRLKDWKEKGGLLADCAILYRSNAQS
RVLEEALMQDAMPYRIYGGLRFFERQEIKDAMAYLRLINNRGDDASFERVVNTPTRGIGD
RTLEILRGNARDQGLNLWQSAKALLNDKVLTGRAGNAVRGFVELIDALEEQVAMLPLHQQ
ADIAIQNSGLKAMYLAEKGEKSQARVENLDELVTACRQYQRPDELEDMSDLSAFLAHASL
ESGENQADEYADAVQLMTLHSAKGLEFPLVLLVGVEEGMFPSQQSTEESGRLEEERRLCY
VGMTRAMEKLYICYAESRRIYGREMFHKPSRFIREMPAECLEEIRLRTQVSRPTQYGRFS
QNEVQQSFDASGIKLGQRVLHPKFGEGVVLNFEGVGQQSRVQIQFDDVGAKWLVTAYARL
EAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcaaccctgctcgacgggctcaacgacaagcaaagagatgccgttgcggcg
ccccgcagcaacctgctggtgctggccggtgccggttcgggcaagacccgggtgctggtg
caccgtatcgcctggctgatgcaggtggaacgctgttcacctttctccatcatcgcggtc
acctttaccaacaaggcggcggccgagatgcgcggccgggtcgagaaggtgatcggcgac
ggcgtgcgcggcatgtggatcggcacctttcacggtatcgcccaccgattgctgcgggcc
caccatctggatgcgggtttgccgcaggatttccagatcctcgactccgacgaccagtac
cggctgatccgccgggtgctcaaggcgctcaatctggacgagaagcactgggccccgcgc
gccgtgatgggctacatcaacggcaagaaggatgaggggctgcgccccggcgacatcgac
ctctacggcgaccccgtcacccgcacctatcagcagatctacaagacctatcaggagacc
tgcgatcgctccggtctggtggacttcgcagaactcttgctgcgcgcccacgagttgtgg
ctgaacaagccgcacatcctcgagcactaccgcgaccgcttccagaacatcctggtggac
gagtttcaggataccaacggcatccagtacgcctggttgcggatgctggcgggcaacagc
ggcaaggtgatgatcgtcggcgacgatgaccagtccatctacggctggcgcggcgccaaa
atcgagaacatccagcgcttcctgaccgactatcagggcgccgagaccatccgcctcgag
cagaactaccgctccaccgccaatatcctcaaagccgccaacagcgtcatcgccaacaac
gccgagcgccttggcaaggagctgtggaccgaaggggccgagggcgagccgatctccctc
tacgccgccttcaacgaggtggacgaagcccgcttcgtggtcggccgtctcaaggattgg
aaggaaaagggcggcctcttggccgactgcgccatcctctatcgctccaacgcccagtcg
cgggtgctggaagaggcgctgatgcaggacgccatgccttaccgcatctacggcggcctg
cgcttcttcgagcggcaggaaattaaagacgccatggcctacctgcggcttatcaacaac
cgtggcgacgacgccagcttcgagcgggtggtcaacaccccgacccgcggcatcggtgat
cgcaccctcgagatcctgcgcggcaacgcccgcgatcaggggctcaacctgtggcaatcg
gccaaggccctgctcaacgacaaggtgctgaccggtcgcgccggtaacgcggtgcgcggc
tttgtcgagctgatcgacgcgctggaggagcaggtcgccatgctgccgctgcaccagcag
gcggatatcgccatccagaactccggcctcaaggcgatgtatctagcggaaaaaggcgag
aaatcccaggcgcgggtagagaacctggacgaactggtcaccgcctgccgccagtaccag
cgcccggacgagctggaggatatgagcgatctctccgccttcctcgcccacgcgtcgctg
gaatccggcgagaatcaggcggacgaatatgccgatgcggtgcagctgatgacattgcac
agcgccaagggcttggagttcccgctggtgctgctggtcggcgtcgaagaaggcatgttc
cccagccagcaatccaccgaggagtcgggccggctggaagaggagcgccgcctctgttac
gtcggcatgacccgcgccatggagaaactctacatctgttatgccgagagccgccgcatc
tacggccgcgagatgttccacaagccgagccgctttatccgcgagatgcccgccgagtgt
ctggaagagatccggctgcgcactcaggtcagccgccccacccagtacggtcgctttagc
cagaacgaggtgcagcagagctttgacgccagcggcatcaaacttggccagcgggtgctc
catccaaaattcggtgaaggggtggtactcaacttcgaaggtgtgggccagcagagccgg
gtgcagatccagttcgacgacgtcggcgccaagtggctggtgacggcctacgccagattg
gaagcgctttag
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