Aeromonas veronii TH0426: AMS64_02080
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Entry
AMS64_02080 CDS
T04529
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
avo
Aeromonas veronii TH0426
Pathway
avo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
avo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AMS64_02080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avo03021
]
AMS64_02080
03400 DNA repair and recombination proteins [BR:
avo03400
]
AMS64_02080
Enzymes [BR:
avo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AMS64_02080
Transcription machinery [BR:
avo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AMS64_02080
DNA repair and recombination proteins [BR:
avo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AMS64_02080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AMQ41273
UniProt:
A0A0T6RJP0
LinkDB
All DBs
Position
446142..447131
Genome browser
AA seq
329 aa
AA seq
DB search
MLGSVTDFLKPRLVDIEQVSPTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEILLNLKGIAVKLEGKDEVTLSLTKSGTGPVTAGDITHGDE
VEIVNPEHVICHLTGANAEISMRLKVQRGRGYVPASARVHNDDEERPIGRLLLDSAFSPI
VRIAYNVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRSATILAEQLEAFVDLRDVSVP
EKKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgctgggttctgtaacagattttcttaaaccgcggctagttgacatcgagcaagttagc
ccgactcatgcgaaagtgactcttgagccactcgagcgtggctttggtcacacgctgggc
aacgccctgcgtcgtattttgctgtcatctatgcccggttgtgcagttactgaagtcgaa
attgacggggtactgcatgagtacagcagcaaagaaggtgtacaggaagacattcttgaa
atcctgctcaacctgaaaggtatcgctgtgaagctggaaggcaaggacgaggtaactctg
tccctgaccaagtctggaacaggccccgttaccgctggtgatatcactcacggtgatgaa
gtcgagatcgtaaacccggagcacgtaatctgccatctgactggtgccaatgctgaaatc
agcatgcgcctgaaagttcagcgcggtcgtggttatgtgcctgcttctgctcgtgttcac
aacgatgacgaagagcgtcctattggtcgcctgctgctggactccgcgttcagccccatc
gttcgtattgcctacaatgttgaggcagcacgtgtggaacagcgtaccgacttggacaag
ctggtcatcgacatggagaccaatggtaccctggatcctgaagaagccatccgtcgttct
gccactatcttggccgagcaactggaagccttcgtggatctgcgcgatgtcagcgtgccc
gagaagaaagaagagaaacccgagtttgatccgattctgctacgtcctgtcgatgatttg
gagctgacagttcgttctgcgaactgtctgaaggcagaagctatccactatattggtgat
ctggtacagcgtaccgaagttgagttgcttaagactcctaacctcggtaagaagtccctg
actgagatcaaggacgtgttggcctcccgtggtctgtctcttggcatgcgccttgagaac
tggccgcccgccagcatcgctgacgagtaa
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