Aeromonas veronii TH0426: AMS64_04425
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Entry
AMS64_04425 CDS
T04529
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
avo
Aeromonas veronii TH0426
Brite
KEGG Orthology (KO) [BR:
avo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avo03016
]
AMS64_04425
Enzymes [BR:
avo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AMS64_04425
Transfer RNA biogenesis [BR:
avo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AMS64_04425
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AMQ41684
UniProt:
A0A2S3XNQ0
LinkDB
All DBs
Position
complement(934676..936712)
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AA seq
678 aa
AA seq
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MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVMHGDRV
TALIRTEKEKEVAEPDTLLEQSVTRFVARVKMFRDRLNVVADHPLIKDAIKARVKKGLDE
KEFKEGDWVVATLKRHALVDGNFSAEIIQKIAAQEDHNVPWWVVLARHNLAQVEPADLPE
WKVIEEEELPRRDLTKVPFFTIDGAKTKDMDDALAITKLDNGWELLVAIADPTAYVAEGS
ELDKEAAQRAFTVYMPGRNVPMIPRTLSDELCSLKEGEERNTLCARLLIAEDGLLLEETE
FFAARICSHARLNYDDVSDWAEHGKELSIDAGVLAQLPLMKAMTEARIAWRTEHALVFPD
RPDYDFELGENGEVLAIHVEPRRIANRMVEESMIAANICAGRVLGKSVGYGIFNVHTGFD
EESLDGAIDLLKSAEAPFERDEIASLSGFCALRRWIDNLDTRWLDGKIRRFQSYALMSSE
PGAHYGLGLDAYATWTSPIRKYGDMVNHRLLKAVIAGKTPGERPSTELTEHLTACRRLHR
MVERDIGDWLYVRYLKAAAGTDQVFNAEIIDVMRAGLKLRLQENGAVVFLPARHILDNKD
RLECNWDNGRVYLDKTEVVYELGQIIEVKLTEAVEETRSLIAKPAVELVPGPAPEAPAAE
SAPADSSETPAEAAPKAE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgaaaacatcccg
aagaaagagggtgttatccgcgcctccgatcggggcttcggctttctggaagtcgatgag
aagaccagctatttcgtgccgcctccctacatgaagaaggtgatgcacggtgaccgggtg
accgccctgatccgcaccgaaaaagagaaggaagtggccgagccggataccctgctggag
cagtccgtcacccgcttcgtggcccgggtcaagatgttccgcgaccgcctcaacgtggtg
gccgaccatccgctgatcaaggatgccatcaaggcccgcgtcaagaagggtctggatgag
aaagagttcaaggaaggtgactgggtggtggctaccctcaagcgccatgcgctggtcgac
ggcaacttctctgccgagatcatccagaagatcgccgcccaggaagatcacaatgtgccc
tggtgggtggtgctggcgcgccacaatctggcccaggtcgagccggctgatttgccggag
tggaaggtgatcgaagaggaagagctgccccgtcgcgatctgaccaaggtgcccttcttc
accatcgacggtgccaaaaccaaggatatggacgatgcgctggccatcaccaagctggat
aacggctgggagctgctggtcgccatcgctgacccgaccgcctatgtggccgaagggagc
gagctggacaaagaggccgcccagcgcgcctttaccgtctacatgccgggccgcaacgtg
ccgatgatcccgcgcaccctctccgacgagctctgctccctgaaagagggcgaggagcgc
aacactctgtgcgcccgtctgctcatcgccgaagatggtctgctactggaggagaccgag
ttcttcgccgcccgcatctgctcccacgcccgtctcaactatgacgacgtctccgactgg
gccgagcatggcaaagagctgtctatcgacgcaggcgtactggcccagctgccgctgatg
aaggcgatgaccgaagcacgcatcgcgtggcgcaccgagcatgcgctggtattcccggat
cgtcccgactacgacttcgagctgggcgagaatggcgaagtgctggccatccacgtcgag
ccgcgccgcatcgccaaccgcatggtggaagagtcgatgatcgccgccaacatctgcgcc
ggtcgcgtgctgggcaagagcgtcggttacggcatcttcaacgttcacaccggctttgac
gaagagtctctcgacggtgccatcgacctgctgaagagtgccgaagccccgttcgagcgc
gacgagatcgccagcctctccggcttctgcgccctgcgtcgctggatcgacaacctcgac
acccgctggctggatggcaagatccgccgtttccagagctatgcgctgatgtcctccgag
ccgggcgcccactacggcctgggtctggatgcctacgccacctggacctccccgatccgt
aaatacggcgatatggtcaaccatcgtctgctcaaagcggtcatcgccggcaagaccccg
ggtgagcgcccgagcaccgagctcaccgagcacctgaccgcctgccgccgcctgcaccgc
atggtggagcgcgacatcggcgactggctctatgtccgttacctgaaagcagccgctggc
accgatcaggtgttcaacgccgagatcatcgacgtgatgcgtgccggtctcaagctgcgt
ctgcaggaaaacggagcagtggtcttcctgcctgcccgtcacatcctcgacaacaaggat
cgactggagtgcaactgggacaatggccgcgtctatctggacaagaccgaagtggtttat
gagctcggccagatcatcgaggtgaagctgaccgaagcggtggaagagacccgctccctt
atcgccaagccggcggtggagttggtgccgggcccggcaccggaagccccggcggccgag
agtgcgccagccgatagcagtgaaacgcccgctgaggctgcccccaaggcggaataa
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