Aeromonas veronii TH0426: AMS64_05120
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Entry
AMS64_05120 CDS
T04529
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
avo
Aeromonas veronii TH0426
Brite
KEGG Orthology (KO) [BR:
avo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avo03016
]
AMS64_05120
Enzymes [BR:
avo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AMS64_05120
Transfer RNA biogenesis [BR:
avo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AMS64_05120
Prokaryotic type
AMS64_05120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AMQ41813
LinkDB
All DBs
Position
1075812..1076870
Genome browser
AA seq
352 aa
AA seq
DB search
MLEQLAYLHGAPTARGILKAEAADFVVNEDLGFEPCGEGEHIFVRVRKTGENTAWVAGLL
ADAAGVNRNAVTWAGLKDRHAVTEQWFGIHLPGKAEPDLSVIESDSIQILQARRHNRKLR
VGYLKGNHFTLRLTGLEQADGLEARLQAIATQGVPNYYGEQRFGRDGNNLEAAKAMFAGK
RIKDRNKRSLYLSAARSMLFNAIVSARIEQGLAHQLLAGDCVMLKGSHSIFSEESVTPEL
EARLASCDVQLTAPQWGRGRLASQGAAAEFEQGVLAPYSDWCDGLEKAGLDQDRRPLLLK
PEQMSWQLDGEALTLSFFLPAGAFATSVVRELMQAEEADHGFRNQTDANSGQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgctggaacaacttgcctatctgcacggggcgcccaccgcccgcggtatcctcaaggcc
gaggccgccgacttcgtggtcaatgaagatctcggcttcgagccctgcggggaaggggag
catatcttcgtccgtgtgcgcaaaaccggcgagaacaccgcctgggtggcgggtctgctg
gccgatgcggccggggtcaatcgcaatgcggtgacctgggcgggcctgaaagatcgccac
gcggtgaccgagcagtggttcggcattcacctgccgggcaaggccgagccggacttgtcg
gtcatcgagagcgacagcatccagatcctgcaagccaggcgtcacaaccgcaaattgcgg
gtcggctacctcaagggcaaccacttcaccctgcggctcaccggtctggaacaggccgac
gggctggaagcgcgcctgcaggccatcgccactcagggcgtgcccaattactatggtgag
cagcgttttggccgcgatggcaacaacctggaagcggccaaggcgatgtttgccggcaag
cggatcaaggatcgcaacaagcgttccctctacctctctgccgcccgcagcatgctgttc
aacgccattgtcagcgcccgtatcgagcaggggctggctcatcagctgctggccggtgat
tgcgtgatgctcaagggcagccactccatcttcagcgaagagagcgtgacccccgagctg
gaagcgcgtcttgcctcctgcgacgtgcagctcaccgccccccagtggggccgtggccgt
ctggccagtcagggcgccgctgccgagttcgaacagggcgtgctggccccttacagcgat
tggtgtgacgggctggagaaagccgggctggatcaggacaggcgccccctgctgctcaag
ccggagcagatgagctggcagctggacggcgaggcgctgaccctctccttcttcctgccg
gcgggcgcgtttgccaccagcgtggtgcgcgagttaatgcaggccgaagaggccgatcac
ggtttcaggaatcagaccgatgcgaattctggtcagtaa
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