Aeromonas veronii TH0426: AMS64_06860
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Entry
AMS64_06860 CDS
T04529
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
avo
Aeromonas veronii TH0426
Pathway
avo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMS64_06860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avo03400
]
AMS64_06860
Enzymes [BR:
avo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AMS64_06860
DNA repair and recombination proteins [BR:
avo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AMS64_06860
Prokaryotic type
AMS64_06860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Virulence_RhuM
Motif
Other DBs
NCBI-ProteinID:
AMQ42110
LinkDB
All DBs
Position
1459604..1460281
Genome browser
AA seq
225 aa
AA seq
DB search
MLTWSDVIGSEKEQDYFKSTLATVRAEREAGKVIYPPATDVFNAFKLTELDQVKVVILGQ
DPYHGPNQAHGLCFSVLPGVRTPPSLVNIYKEMQRDLPDFVTPNHGFLESWAKQGVLLLN
TVLTVQAGQAHSHAHLGWETFTDRVIEQINASCQGVVFLLWGAHAQKKGRFIDRQRHYVL
TAPHPSPLSAHRGFIGCGHFSETNRLLEQQDKSPIEWKSVCIPLD
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgctgacctggagtgatgtgattggctctgagaaagagcaggactatttcaagagtacg
ctggcaaccgtcagagccgagcgggaagcgggcaaggtgatctacccgccagctaccgat
gtgttcaatgccttcaagctgaccgagctggatcaggtcaaggtggtgatcctggggcag
gacccctaccacggccccaatcaggcgcacgggctctgcttctccgttctgcccggcgtg
cgtacgcccccctcactggtcaacatctataaagagatgcagcgtgacctgccagatttc
gtcacacccaatcacggctttctcgaatcctgggccaaacaaggtgtcttgctgctcaac
actgtgctgacggtgcaggccggtcaggcccattcccatgcccatctgggatgggagacc
tttaccgatcgggtcatcgagcagatcaatgccagttgtcagggtgtggtgttcctgctg
tggggtgcccacgcccagaagaagggacgtttcatcgaccgccagcgccactatgtgctg
accgcgccgcacccgagcccactatctgcccaccgcggtttcatcggttgcggccacttt
agcgagaccaatcgcttgctggaacaacaggacaagagtccgatagagtggaaatctgtc
tgcatcccacttgattga
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