Aeromonas veronii TH0426: AMS64_09145
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Entry
AMS64_09145 CDS
T04529
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
avo
Aeromonas veronii TH0426
Brite
KEGG Orthology (KO) [BR:
avo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avo03016
]
AMS64_09145
Enzymes [BR:
avo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AMS64_09145
Transfer RNA biogenesis [BR:
avo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AMS64_09145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
AMQ42526
LinkDB
All DBs
Position
1951359..1952471
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AA seq
370 aa
AA seq
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MHYQLITQQAELEQYLVSLADVPLAIDTEFVRTRTYYPQLGLFQIYDGEHLALLDPLTLD
LSALWQRLGREGQIAILHASGEDLELIQHQAGHLPNQMHDTQLATAFLGYGVSVGFGALV
NEFLGVELEKDQARTDWLARPLTPRQLEYAAADVFYLMPLYEKVMAKLRESGKFAWFEQE
CQNHSARKTQGSDPRQAYLDIVNAWQLGRRELAILRELAAWRQQEAVRRDLALNFVVKEL
HLFKVAERRPASLRDLNELGLSPIEIKIHGKRMLDIVAKAQQSDPDSWPEPIRRLVDFPQ
YKAELKRIKAMVEEKAKANNIPPELIASKKIIHQYFTWSWRMNDEERARSDKPMLLQGWR
HELVGHLLAQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcactatcaacttatcactcagcaagccgaacttgagcagtatctcgtttctctggcc
gatgttcccctggctatcgatactgaattcgttcgcacccgtacctactacccccagctt
ggcctgttccagatctatgacggcgagcatctggcgctgctggatccgctgaccctggat
ctctccgccctctggcagcgactgggccgggaagggcagatcgccatcctgcacgcctct
ggcgaagatctggagcttatccagcatcaggcgggccacctgcccaaccagatgcacgat
acccagctggctaccgcctttctcggttacggcgtctcggtcggctttggtgcgctggtg
aatgaattcctcggggtcgagctggaaaaagatcaggcgcgcaccgactggctggcccgc
ccgcttacaccgcgtcagctcgaatacgcggcagcggatgtcttctacctgatgccgctc
tacgagaaggtgatggccaaactgcgggaaagcggcaagtttgcctggttcgagcaggag
tgtcagaaccactctgcccgcaagacccagggtagcgatccccgccaggcttatcttgac
atcgtcaacgcctggcaactgggtcgccgcgagctcgccattctgcgcgagctggccgcc
tggcgccagcaagaggcggtgcgccgcgatctggccctcaactttgtggtcaaagagctg
cacctgttcaaggtggcagagcgccgtcctgcctctctgcgggatctcaacgagctcggc
ctctcgcccatcgagatcaagatccacggcaagcggatgctcgatatcgtcgccaaggcg
cagcagagcgatcctgacagctggcccgagcccattcgccgactggtggacttcccccag
tacaaggccgagctcaagcgcatcaaggccatggtggaagagaaggccaaggcgaacaat
atcccgcccgagctgattgccagcaagaagatcattcaccagtacttcacctggagctgg
cggatgaacgacgaagagcgggcccgcagcgacaagccgatgctgctgcaagggtggcgt
catgagctggtcggtcacctgctggcacaataa
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