Aeromonas veronii TH0426: AMS64_11075
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Entry
AMS64_11075 CDS
T04529
Name
(GenBank) diguanylate phosphodiesterase
KO
K18765
RNase E specificity factor CsrD
Organism
avo
Aeromonas veronii TH0426
Brite
KEGG Orthology (KO) [BR:
avo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avo03019
]
AMS64_11075
Messenger RNA biogenesis [BR:
avo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AMS64_11075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
ZER1-like_2nd
RPN13_C
Motif
Other DBs
NCBI-ProteinID:
AMQ42874
UniProt:
A0A0T6S6A3
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All DBs
Position
2421766..2423406
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AA seq
546 aa
AA seq
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MVHKLGRTLFLIATIVTIPLLLLQAVWLALQSTPLTLAIILATTLLGMILLLMLAIRTMD
GMLQHQELTWVKAIRGRDPSQLDEPASQEVLQQLLEQFESAEQSAHRQLTELSNLATTDE
LTQLLNRHAFRRDMTELLQRDQDTQTATLVLIRATELGKINAQRGFQSGDAYIKDMAALI
KRVVSRFPGNQVYRISGADFAVLVQPVANIPPHLLGQDLKVAFDHYQDQHELESTGYSGL
TKLSSGQKIEAVLARADLALARAQTETINGWAIQQDDSASDLQGQHHWRDVLTEVLAQER
LSFTYQPIQPLHRSMLAYNEIYTRFSGNDGTALPTDTLFAMAQRLDMVMRLEQLVITHIM
RQYRAFGANQSRWGINLSPNLLQNSAFLIWLDRQLLKDPNTSANLVFELDEEHLERNLTG
AKRVFELLRRNGSRSAIANFGKGIGSFTLFRELKPDYIKLDPALITGLEQDQTNQQFVRM
IVDVSHRMGCQVIAEGVEQLGQKQLLQGMYVDGLQGYLIARPQPLRPDISQLGLFTEDAS
ASKGSE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggttcacaagctcggacgtaccctctttctgatcgccaccatagtgaccatacccctg
ctgctcctgcaagcagtttggttggcccttcagagcacaccgctcacattggccattatt
ctggccaccacactgcttggcatgatcctgctgttgatgctggccatccgcaccatggat
ggcatgctccagcatcaggagctcacctgggtcaaggcgatcaggggacgggatccctca
caactcgatgagcccgcctcccaggaggtgctgcaacagctgctggaacagttcgaaagc
gccgagcagagcgctcatcgccagctgaccgagctcagcaacctggccaccaccgacgag
ctgactcagcttctcaaccgccacgcatttcgccgcgacatgaccgagttgctgcagcgg
gatcaggacacccagaccgcgaccctggtgctgatccgtgccaccgagcttggcaagatc
aacgcccagcgcggattccagtctggtgatgcctacatcaaggacatggcggcccttatc
aagcgggtggtaagccgcttcccaggcaatcaggtctaccgcatttcgggggctgatttc
gccgtgctggtgcaaccggtggccaatattcctccccatctgctggggcaggatttgaag
gtggccttcgatcactatcaggatcagcacgagctggagagcaccggttactcgggtctg
accaagctcagcagcggccagaagatcgaagccgtgctggccagagcggatctggcgctg
gctcgcgcccagaccgaaaccatcaacggctgggccatccagcaggatgacagcgcctcc
gatctacaggggcaacaccactggcgcgacgtgctgaccgaagtgctggcgcaggagcgc
ctcagctttacctaccagccgatccagccactgcaccgtagcatgctggcctacaacgag
atctacacccgcttcagcggcaatgacggcactgccctgcccaccgacaccctgtttgcc
atggcacagcggctcgatatggtgatgcggctggagcagttggtcattacccatatcatg
cgccagtatcgggcctttggtgccaaccagagtcgctggggaatcaacctctctcccaac
ttgctgcaaaacagcgccttcctgatctggcttgaccgccagctgctcaaggatcccaat
accagcgccaatctggtgttcgaactggatgaagagcatctggaacgcaacctgaccggc
gccaagcgggtgtttgaactgctgcgccgcaacggcagccgctcggccatcgccaatttc
ggcaaggggatcggctcctttaccctgtttcgcgagctcaagcccgactacatcaagctg
gacccagccctgatcaccgggctggagcaggatcagaccaaccagcagttcgtgcggatg
atcgtcgatgtatcacatcggatggggtgtcaggtgattgcagagggggtggaacagctt
ggccagaaacagctgctgcaggggatgtacgtggatggcttgcagggctatctgatcgcc
cggccgcaaccgctgcgaccggatatcagccagctggggctctttactgaggatgcttca
gcttcaaaagggtcagaatga
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