Aeromonas veronii TH0426: AMS64_13115
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Entry
AMS64_13115 CDS
T04529
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
avo
Aeromonas veronii TH0426
Brite
KEGG Orthology (KO) [BR:
avo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avo01011
]
AMS64_13115
Enzymes [BR:
avo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AMS64_13115
Peptidoglycan biosynthesis and degradation proteins [BR:
avo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AMS64_13115
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
LysM2_CERK1_LYK3_4_5
LysM_OapA
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
AMQ43235
LinkDB
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Position
2870902..2872455
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AA seq
517 aa
AA seq
DB search
MKVRTALLAALLLSGCQNLSHQDDRALTAIEPIKSPLVKKKAHKKHSSHFLFGDEQLDEM
EDTDNLWVRISDDMQLETPDNPRIRQQREWLLRNDKHLATIASRAEPYLYLMVEEIERRE
LPMELITVPMIESMFDPHARSRSNAVGLWQFVPATGRNFGLRHDNWYDGRRDVLASTNAA
LDYLEYLNRFFDGDWLQTLAAYNAGEGRVRNAIQRNQRAGKPTDYWSLDLPRETRMYVPK
ILAMADMISNADKYNIQLPVLANEPKLRVVETGSQIDLNVAAQLAGLRTSQLKEVNPALS
RGVMSPRGPYRLLVPVEYADTLELALADLPKSERIRTRSYQVTSGDTLSRIAQNHGVSVS
ELKLANNLRSNNLRRGQQLVIPTHGQVSSKASSASKPQQLASRGSSQKAKVSYKVRSGDN
LWSISQAHGVSHEELAKWNGLNAKSALKPGMKLVVYPKQGKKSDKSMVYQVRRGDSISSI
AARFQVAINDVMRWNQLDKGDYLKPGQELTLFVKNNS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtacgaacggccttattggcagcgctgttgctcagcggctgccaaaacctgagc
catcaggatgaccgggcgctaacggcaatcgagccgatcaagtcccccctggtcaagaaa
aaagcgcataaaaaacactcttcccatttcctgtttggcgatgaacagctggacgaaatg
gaagatacggacaatctgtgggtgcgtatcagcgatgatatgcaactggaaactccggac
aatccgcgcatccgccagcaacgtgagtggctgttgcgcaatgataagcatctggcgacc
attgccagccgggctgaaccctacctctatctgatggtagaggagattgaacggcgtgag
ctgccaatggagcttattactgtcccgatgatcgagagcatgtttgatcctcatgcccga
tcccgcagcaatgccgtcggactctggcagtttgtgccagcgacaggcagaaacttcggt
ctgcgccacgacaactggtatgatggacggcgcgatgtgctggcctccaccaatgcggcg
ctcgactatctggaatacctgaaccgcttctttgacggtgactggctgcaaacgctggcc
gcctacaatgccggtgaaggccgggtgcgcaacgccatccagcgtaaccagcgcgcaggc
aaaccgaccgactactggtcgctcgatctgccgcgcgaaacccggatgtatgtgcccaag
atcctcgccatggctgacatgatcagcaatgcggacaagtacaatatccagttgccggtg
ctcgccaacgagccgaagctgcgagtggtggagaccggcagccagatcgatctgaacgtg
gccgcccaactggcaggtctgcgcacctcacagctcaaggaggtcaatccggccctgagc
cgtggtgtgatgtcgccccgtggcccttaccgcctgctggtaccggtagaatatgccgat
accctggagctggcactggccgatctgcccaagagcgagcgtattcgtacccgctcctat
caggtcaccagtggcgataccctgtcgcgtatcgcccagaatcatggcgtcagcgtgagt
gagctgaagctggcaaacaatctgcgcagcaacaacctgcgtcgcggtcagcaactggtg
atcccgacccacggtcaggtcagcagcaaggccagctccgccagcaaaccgcagcagctg
gcaagccgtggtagcagccaaaaggccaaagtcagttacaaggtgcgctcgggtgacaac
ctgtggagcatcagccaggcacacggcgtctcccacgaagagctcgccaagtggaatggt
ctgaatgccaagtcggcgctcaagccaggcatgaagctggtggtctatcccaagcaaggg
aagaagagcgacaaatcgatggtgtatcaggttcgccgtggcgactccatctcctccatc
gcagctcgcttccaagtggccatcaacgatgtgatgcgctggaatcagctggataaaggg
gattacctcaagcccggtcaggagctgactctgtttgtgaagaacaacagctaa
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