Aeromonas veronii TH0426: AMS64_17125
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Entry
AMS64_17125 CDS
T04529
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
avo
Aeromonas veronii TH0426
Brite
KEGG Orthology (KO) [BR:
avo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avo03400
]
AMS64_17125
DNA repair and recombination proteins [BR:
avo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMS64_17125
Archaeal homologous recombinant proteins
AMS64_17125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
ABC_ATPase
MMR_HSR1
MeaB
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
AMQ43944
LinkDB
All DBs
Position
3740348..3744100
Genome browser
AA seq
1250 aa
AA seq
DB search
MKILSLSGENLASLTGPFTIDFTRGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR
FIANRKNVAEVGRMDDEEKLKANDVRGILSRGHASGFAEVQFRGCDGRIWLARWAVRRAR
NRSEGRFQAQERTLTDVESGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL
KSDANERSALLERMTGTELYSAISIQTYERAREEQQKLATIAQRLGDVALMDEATREQWV
SQQVSLSTTLKHEQQQQQLMQDLRDLNSRIAAQLQGCAEGQAALDAALQAHGAAAPEHEE
FARAEQAQVARADHDELARLTLEVQQQEKVIAELGPELAKLEEQTQQSALTEQQLLAEKI
AAEREWGALQPELKRAQELDTRIREKVQQLQKIQQEGAQEREVQLTLEQGWREQSRQVEL
LKQQHQQWGLWLEEHKELAPVARQWQPLLTAMQDWAEDADKLQQLLTLRDHKLRALQQLQ
RQLEQGQQERDYWQHEQARLQQQQNELQEQQWESRLAKAQEQWQQQTEQLGQLRQLLELA
DYGRNHGEQHDRLQQEIAQLEQALGKLATLSEELAPARERLALQRDEARHALEQSRAIAS
FEQYRHILSDGEPCPLCGSGEHPYSQSQPQVAGILGQLAERSRSLELEWERLNHQYIQCE
SERQELARQLAVRQQHLPELETRAEQLTQRWQQLGGDTLLGHPLPLRQSPIEWNELMSTL
LGHGQALELGLAQSQQQLRQAQLGQQQLQGVRQQLSQLAAQHQQFDQQWQEADRQRIALE
GEVKGMGEQEATLRQRLEQGAHRLDEQMGGQPWRQWLGSQQWHEWQRACEAWLHGQSEWE
RLASEIASLTPALSAQEARLQTQRELLHKLERDYKEHEQQRQGLLTSRSACLGGEEIPLV
ESRWQQRLQQLASELELMQSGARVLHERQTELKTRLTHVEQEKQVSSRRKREVLGRWAAH
ASTLGIAEYDLRRLLAISPDELKARRTALQGLEDAVGEARTRLAERQRALALEESKRDRY
REHHPELAALPDAELSEQLTALDARCRALEEQLFECKSKLAQAEAAALKAGSLQQELAAQ
QAIADHWQQLCDLIGQANGAKFRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLA
LQVVDLYMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS
LDLALASLDSLQAAGRQIGVISHVQTLVERIGVQIRVEALGGGESRVVVP
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttgtctctgtcaggtgagaatctggccagtctgactggccccttcaccatc
gactttaccaggggggcgctcggcgccgcgggtctgtttgccatcaccggcaacaccggc
gccggcaagagcacattgctcgacgccatttgtctggccttatacgacgagatgccgcgc
tttatcgccaatcgcaagaacgtggccgaagtgggccgcatggatgacgaggagaagctc
aaggccaacgacgtgcgcggcatcctcagtcgcggccacgccagcggctttgccgaggtg
cagtttcgtggctgcgatggtcgcatctggctggcccgctgggcggtgcgccgggcgcga
aaccgctcggaggggcgctttcaggcgcaagagcgaaccctgaccgatgtggagtccggg
caggtattctccggcagcaagcgggagctgcaggatcgcatcgacgagctggtgggtctc
tcctgggagcagttccgccgcgcggtgatcctgccgcaaggggaatttgccgcctttctc
aaatcggatgccaacgagcgctccgccctgctcgaacggatgaccggcaccgagctctac
tccgccatctccatccagacctatgaacgggcgcgggaagagcagcagaagctggccacc
atcgcccagcgcctcggcgacgtggcgctgatggatgaagcgacccgcgaacagtgggta
agccagcaggtgagcctctccaccaccctcaagcacgagcagcaacagcagcagctgatg
caggacttgcgcgacctcaatagccgcattgccgcccagctgcagggctgcgccgagggg
caagcggcgctcgatgccgccctgcaggcccacggcgccgcggcccccgagcacgaggag
ttcgctcgtgccgaacaggcccaggtggcccgagccgatcacgacgagctggcccgcctc
acccttgaggtacagcagcaggagaaggtgatcgccgagctggggccggagcttgccaaa
ctcgaggagcaaacccagcagagcgcgctgaccgagcagcagctgctggcggagaagatc
gccgccgagcgggaatggggtgcactgcaacccgaactcaagcgggcacaggagctcgat
acccgcatcagggagaaagtgcagcagttgcagaagatccagcaggagggggcacaggag
cgagaagtacaactaaccctcgagcagggctggcgcgagcagagccgacaggtggaactg
ctcaagcagcagcaccagcagtgggggctttggctcgaagagcacaaggagctggcaccg
gtggcccgccagtggcagcccctgctcaccgccatgcaggattgggccgaggatgccgac
aagctgcagcaactgctcaccctgcgggatcacaagctgcgcgccctgcaacagttgcag
cgccagctggagcaaggtcagcaggagcgcgactactggcaacatgaacaagctcggctg
caacagcaacagaacgagctgcaggagcagcagtgggagagccgcctcgccaaggcgcag
gagcagtggcagcagcagaccgaacaactgggtcagctgcgccagttgctggagctggcc
gattatggccgcaaccacggcgaacagcatgaccgcttgcagcaggagattgcccagctg
gagcaggcgctgggcaagctcgccaccctaagcgaagagctggcgccagcccgcgagcgg
ctcgccctgcagcgggatgaggcgcgccacgcgctggagcagtcccgcgccatcgccagc
ttcgagcagtatcgccatatcctgagcgatggcgaaccttgcccgctgtgcggttccggg
gagcacccctacagccagagccagccccaggtggcggggatcctgggtcagctggcggag
cggtcccgcagcctggagctggagtgggaacggctcaatcatcaatatattcagtgcgag
agcgagcgtcaggagctggcccgccagctggcggtacgccagcagcacctgccagagctg
gaaacccgcgccgagcagctgacccagcgctggcaacagctgggaggcgataccctgctg
ggtcatccgctgccgctgcgccaaagtcccattgagtggaacgagctgatgagcaccctg
ctcggccatggccaggcgctggagctggggttggcccagagccagcagcagctgcgtcag
gcccagctcggtcagcaacagctgcagggggtgcgtcagcaactgagccagctggcggcc
caacaccagcagtttgaccagcagtggcaggaggccgaccgccagcgcatcgcgctggaa
ggagaggtaaaggggatgggcgagcaggaagcgaccctgcgccagcgcctcgaacaaggc
gcccaccgcctcgacgagcagatgggcggccagccgtggcgccaatggctcggcagccag
cagtggcacgagtggcagcgagcctgcgaagcctggctgcacggccagagtgagtgggag
cggctggccagcgagatcgccagcctcaccccggccctgagcgcacaggaggcgcgcctg
cagacccagcgcgagctgctgcacaaactcgagcgggactacaaggagcacgagcagcag
cgacagggactgctcaccagccgcagcgcttgtcttggcggtgaggagatcccgctggtc
gagagccgctggcaacagcgactgcaacaactcgccagcgaactggagctgatgcaaagc
ggcgcccgcgttctgcacgaacggcagaccgagctcaaaacccgcctcacccatgtggag
caggagaaacaggtaagcagccgccgcaaacgggaggtgctggggcgctgggccgcccac
gccagtacccttggcattgccgagtacgacctgcgccgtctactcgccatcagccccgat
gaactcaaggctcgccgcactgccctgcaagggctggaggatgcggttggcgaggcgcgc
acccgccttgccgagcggcaacgggcgctggcactggaggagagcaagcgggatcgctat
cgcgagcaccaccccgagctggccgccctgccggatgcagagctgagcgagcagctgacg
gcgctcgatgcccgttgtcgcgcccttgaagagcagctgttcgagtgcaagagcaagctg
gcacaggccgaagccgcagccctcaaggcgggcagcctgcaacaggagctggctgcccag
caggcaatagccgatcactggcagcagctgtgcgatctgatcgggcaggccaacggcgcc
aagttccgcacctttgcccagagcctcaccctcgagcgtctgctgctggaggccaacgcc
cagctcgccgagctatcaccgcgctaccggctggagcgggtacccggcaccgatctggcg
ctacaagtggtggatctctacatgggggacgaggtgcgttcggtggactccctctccggt
ggcgagagttttctggtgtcgctggcgctggcgctggccctctccagcctctcgtcacgg
cagacccaggtcgagtcgctgtttatcgacgaggggtttggcaccctggatccggacagc
ctggatctggcgctcgccagcctcgactccctgcaggccgccggtcgccagatcggggtc
atctcccacgtccagacgctggtggagcggatcggcgtgcagatcagggtcgaagccctc
ggcggcggcgagagccgggtagtggttccctga
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integrated database retrieval system
