Aeromonas veronii TH0426: AMS64_18760
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Entry
AMS64_18760 CDS
T04529
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
avo
Aeromonas veronii TH0426
Brite
KEGG Orthology (KO) [BR:
avo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avo03016
]
AMS64_18760 (truB)
Enzymes [BR:
avo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AMS64_18760 (truB)
Transfer RNA biogenesis [BR:
avo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AMS64_18760 (truB)
Prokaryotic type
AMS64_18760 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AMQ44250
LinkDB
All DBs
Position
complement(4110712..4111662)
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AA seq
316 aa
AA seq
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MTRRRRFKGRDVHGILLLDKPTGLTSNDVLQKVKRIYNAAKAGHTGALDPLATGMLPICL
GEATKFSQYLLEADKRYEVTAKLGERTNTSDSDGEVVSTRPVNVAVGTLIEALDQFRGPI
MQVPSMYSALKHNGRPLYEYAREGIEIEREARPITVFELKLLSFEGDEVRLEVHCSKGTY
IRSLVDDLGEVLGCGAHVTQLRRTQVASYPYERMLTLEQLECIFEQAKAESIPPREQLDP
LLLPMDTAVASLPEVNMLAVVAAYVNQGQAVQAAGAPQSGQVRMTVGPEREFIGVGEIDD
DGRVAPKRLVRYHDEE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaagacgtcgtttcaagggccgtgatgtgcacggcattctgctgctggacaag
ccgaccggcctgacctccaacgatgtgttgcagaaggtcaagcgcatctacaacgccgcc
aaggccggtcacaccggcgcactggatccgctggcgaccggcatgctgccgatctgcctc
ggcgaggccaccaagttctcccagtatctgctggaagcggacaaacgctatgaggtgacc
gccaaactgggcgagcgcaccaacaccagcgactccgatggtgaggtggtctccacccgt
ccggtgaacgtggctgtcggtaccctgatcgaggcgctggaccagttccgtggccccatc
atgcaggtgccgtccatgtactccgcgctcaagcacaacggccgtccgctctacgaatat
gcccgcgaaggcatcgagattgagcgtgaagcccgtcccatcaccgtattcgagctcaaa
ctgctgagctttgaaggtgatgaagtgcgccttgaagtgcactgcagcaagggcacctat
atccgctctctggtggatgatctgggtgaagtgctgggttgtggcgcccacgtgactcag
ttgcgccgtacccaggtggccagctatccgtatgagcggatgctgactctggagcaactc
gagtgcatcttcgagcaggccaaggccgagagcatcccgccgcgcgagcagctggatccg
ctgttgctgccgatggacaccgccgtagcaagcttgcccgaggtgaacatgctggctgtt
gtggctgcctatgttaatcagggccaggccgtgcaggcagcgggggcgccgcaaagcggt
caggttcgcatgacggtcggcccggagcgcgagttcatcggggttggcgagattgatgat
gatggccgcgtcgctcccaagcgactggtgcgttatcacgacgaggagtga
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