Arcobacter venerupis: AVENP_0003
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Entry
AVENP_0003 CDS
T06858
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
avp
Arcobacter venerupis
Brite
KEGG Orthology (KO) [BR:
avp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avp03032
]
AVENP_0003 (gyrB)
03400 DNA repair and recombination proteins [BR:
avp03400
]
AVENP_0003 (gyrB)
Enzymes [BR:
avp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AVENP_0003 (gyrB)
DNA replication proteins [BR:
avp03032
]
Prokaryotic type
DNA Topoisomerases
AVENP_0003 (gyrB)
DNA repair and recombination proteins [BR:
avp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AVENP_0003 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QKF65586
UniProt:
A0AAE7B6N7
LinkDB
All DBs
Position
2586..4907
Genome browser
AA seq
773 aa
AA seq
DB search
MSQQEYGASNIKVLKGLEAVRKRPGMYIGDTNTNGLHHLVYEVVDNSIDEAMAGYCKNIK
ITMSKDHWIKVEDDGRGIPTAIHEGEGISAATVVLTVLHAGGKFDKDTYKVSGGLHGVGV
SVVNALSKHLKMTIYREGKIHYQEFKCGIPQGVIEVIGDSPRKTGTTIEFLADDSIFEVN
KYEFAILAKRFREVAYLNSFISITLDNEITKTKEVYHFEGGLKQFVEDMNKETAVCDAVA
FNDNVDGVEVDIAVMYNDTYVEKTLSFVNNIRTIDGGTHEAGFKAGLTRSIVKYLNENAA
AREKDTKITGDDVREGLIAVVSVKVPEPQFEGQTKSKLGSSYVKAITQKLTGDALDKYFE
ENPQQAKAIMEKSLMAARGREAAKKARDLTRKKDSMSVGTLPGKLAECQSKDPAIRELYL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSRLDKILKSDEIRNMITALGCGIGEDF
DNEKIRYHKIIIMTDADVDGSHIQTLLLTFFFRFLRPVIENGYLYIAQPPLYRYKKGKNE
IYLKDDTALSAFLIENGLESFTFEGLGYNDLLDLFKIVSRYRSMLAQLAKRYSLLEVLKY
LIENSELVNLDFASLYEKVKEFLDARGHNILSKNVTETRIQLFVQTKEGLEELIIDEELF
ASSYFSEATYIYNKLVERDLTVFEGRDLLDILDDIETLAKKGAYIQRYKGLGEMNPEQLW
ETTMIPDNRRLLRVKIEDAEVASDTFTLFMGDEVEPRRNYIEEHAKDVEHLDV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacaagaatacggcgctagtaacattaaagttttaaaaggtcttgaagctgta
agaaaaagacctggaatgtatattggtgatacaaatacaaatggtctacatcacttagtt
tatgaagtagtagacaactctattgatgaagcaatggctggttattgtaaaaatatcaaa
attactatgagcaaagatcattggattaaagttgaagatgatggaagaggaattccaact
gctattcatgaaggtgaaggaataagtgcagcaactgttgttttaactgttttacatgct
ggtggtaaatttgataaagatacttataaagtttctggtggacttcatggtgttggggtt
tctgttgttaatgcattatcaaaacacttaaaaatgacaatttatagagaaggaaaaatt
cattatcaagaattcaaatgtggtattcctcaaggtgttattgaagttattggtgatagc
cctagaaaaacaggaacaacgattgaatttttagctgatgattctatttttgaagtaaat
aaatatgagtttgctattttggcaaaaagatttagagaagttgcatatttaaattcattt
atttctattactttagataatgaaattacaaaaacaaaagaagtttaccattttgaaggt
ggtttaaaacagtttgttgaagatatgaataaagaaactgctgtttgtgatgcagttgca
tttaatgacaatgttgacggtgtagaggttgatattgcagttatgtataacgatacttat
gttgaaaaaactttatcttttgtaaataatattagaacaattgatggtggaactcatgaa
gctggttttaaagccggacttacaagatcaatcgttaaatatttaaatgaaaatgcagca
gcaagagaaaaagatacaaaaattactggtgatgatgtaagagaaggattaattgcagtt
gtttctgtaaaagttcctgaaccacaatttgaaggtcaaactaaaagtaaactaggttct
tcttacgtaaaagctattactcaaaaattaactggtgatgctttagataaatattttgaa
gaaaatccacaacaagcaaaagctattatggaaaaatctttaatggcagcacgaggtaga
gaagctgcaaaaaaagctagggatttaactagaaaaaaagattctatgtctgtaggaaca
cttcctggaaaattagcagaatgtcaatctaaagatcctgctattagagaattatatctg
gtggaaggggattctgctggaggttcagcaaaacaaggaagagatagagttttccaagca
attttaccactaaaaggtaagattttaaatgttgaaaaatcaagacttgataaaattcta
aaatcagatgagattagaaatatgattacagctcttggttgtggtattggtgaagatttt
gataatgaaaaaatcagataccataaaatcattatcatgacagatgctgacgttgatgga
agccatattcaaacacttttattaactttcttctttagatttttaagaccagttattgaa
aatggatatttatatattgctcaaccaccgctttatagatataaaaaaggtaaaaatgaa
atttatctaaaagatgatacagctttatctgcatttttaattgaaaatggtttagaatca
tttacttttgaaggattaggatataacgatttattagatttatttaaaatagtttcaaga
tatagaagcatgttagctcaattagcaaaaagatactctttacttgaagttttaaaatat
ttaattgaaaatagtgaacttgtaaatcttgattttgcatcattatatgaaaaagtaaaa
gaatttttagatgcaagaggtcataatattctttctaaaaatgttacagaaacaagaatc
cagttatttgtacaaacaaaagagggtttagaagagttaattattgatgaagaactattt
gcatcatcatattttagtgaagcaacttatatttataataaattagttgaaagagattta
acagtatttgaaggtagagatctattagatatcttagatgatattgaaactttagctaag
aaaggtgcatacattcaaagatataaaggtcttggggaaatgaatcctgagcaattatgg
gaaactactatgattccagataatagaagacttttaagggttaaaattgaagatgcagaa
gttgcttctgatacatttactttatttatgggtgatgaagttgaacctagaagaaactat
attgaagaacacgcaaaagacgttgaacacttagacgtttaa
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