Arcobacter venerupis: AVENP_0017
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Entry
AVENP_0017 CDS
T06858
Symbol
nifA
Name
(GenBank) Nif-specific transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
avp
Arcobacter venerupis
Pathway
avp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AVENP_0017 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avp03000
]
AVENP_0017 (nifA)
Transcription factors [BR:
avp03000
]
Prokaryotic type
Helix-turn-helix
Other families
AVENP_0017 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_5
GAF_2
GAF_3
AAA
AAA_2
Mg_chelatase
AAA_16
AAA_7
bpMoxR
AAA_3
Motif
Other DBs
NCBI-ProteinID:
QKF65599
LinkDB
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Position
complement(14732..16261)
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AA seq
509 aa
AA seq
DB search
MFDKSACMSCLTIRELTTLYEISSVISNHYDLQTSLEKSMKILKNSLSLENCVVHILEDD
VLNVFASIELSKFQKTLASYKVGEGVTGMVAESKEPVVVENIHNNSIFLNKSGKRDFNGK
SYAAVPLMIDNESIGVLGAVITKNAEIQLDDTVRILTIVSSIFAQTIHSYQLYQKEKERL
QELKLYYKMEWDSKVHNFGDIIGDSPKMEQVFKVIQRIAQSDVTVLVRGETGTGKELVAA
AIHKRSNRKDEPFIKLNCAAITDTLLESELFGHEKGAFTDARETRKGRFELADGGTLFLD
EIGDISPSAQVKLLRVLQEREFERVGGSKTIKVNVRLVAATNRNLEQMVKDGKFREDLYY
RLNVIPIDLPPLRERGEDIKQLVNFFLERAMRNHKKRVTITDEAMDALCSYPWPGNVREL
ENTIERIVLMGNEEGINKYDMLLLLPALNDQKLKSDYKPISKKSLTLEELEKEAIIEALE
NNDYNQSNAAVELGITLRQMGYKIKKYEI
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataaatctgcttgtatgagttgtttaactataagagaattaacaactctatat
gaaatttcttcagttatttcaaatcattatgatctacaaacttctcttgaaaaatcaatg
aaaatattaaaaaattcgttgagtcttgaaaattgcgtagttcatattttagaagatgat
gttctaaatgtttttgcgtctattgagttgtcaaaattccaaaaaactcttgcttcttat
aaagtaggagagggtgttacaggaatggtcgctgaatcaaaagaaccagttgttgtagaa
aatattcataataactctatttttctaaataaatcaggaaaaagagattttaatggaaaa
tcttatgcggccgttccattaatgatagataatgaatccataggtgttttaggtgcagtg
attactaaaaatgctgagatacaactagatgatacggttagaatattaacaattgtaagt
tcaatctttgcacaaactattcattcttatcaactatatcaaaaagaaaaagagagactt
caagaactaaaactttattacaaaatggaatgggattctaaagtgcataactttggagat
attattggagatagtccaaaaatggaacaagttttcaaagttattcaaagaattgcccaa
tctgatgtaactgtattagttagaggagaaacaggaactggaaaagagcttgtagctgct
gctattcataaaagaagtaatagaaaagatgagccatttatcaaactaaattgcgctgct
attactgatactctacttgaaagcgaactttttggacatgaaaaaggtgcatttacagat
gcaagagagacaagaaaaggaagatttgaactagctgatggaggaactctttttttagat
gaaataggagatatttcaccctcagcacaagtaaaacttttaagagttttacaagaaaga
gaatttgaaagagttggtggaagtaaaactataaaagtgaatgtaagacttgtagctgca
acaaatagaaatcttgaacaaatggttaaagatggaaaatttagagaagatttatattat
agattaaatgttattcctattgatttaccaccacttagagaaagaggtgaagatattaaa
caacttgtaaacttctttttagaaagagccatgagaaaccacaaaaaaagagtaaccatc
actgatgaagctatggatgcactctgtagttacccgtggccgggcaatgtaagagaatta
gaaaatacaattgaacgtattgttttaatgggaaatgaagagggaataaacaaatatgat
atgttacttttacttcctgcacttaatgatcaaaaattaaaaagtgattataaacccatt
tctaaaaaaagtttaactttagaagaattggaaaaagaagcaattattgaggcacttgaa
aataatgattacaatcaatcaaatgcagcagtagagttaggaataactcttagacaaatg
gggtataaaataaaaaaatatgaaatctaa
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