Arcobacter venerupis: AVENP_0418
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Entry
AVENP_0418 CDS
T06858
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
avp
Arcobacter venerupis
Pathway
avp03030
DNA replication
avp03430
Mismatch repair
avp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AVENP_0418 (dnaX)
03430 Mismatch repair
AVENP_0418 (dnaX)
03440 Homologous recombination
AVENP_0418 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avp03032
]
AVENP_0418 (dnaX)
03400 DNA repair and recombination proteins [BR:
avp03400
]
AVENP_0418 (dnaX)
Enzymes [BR:
avp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AVENP_0418 (dnaX)
DNA replication proteins [BR:
avp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AVENP_0418 (dnaX)
DNA repair and recombination proteins [BR:
avp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AVENP_0418 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_5
AAA_22
ResIII
AAA_14
AAA_19
AAA_30
AAA_assoc_2
RCF1-5-like_lid
TIP49_C
AAA_24
AAA_16
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QKF65992
UniProt:
A0AAE7E3I5
LinkDB
All DBs
Position
415256..417289
Genome browser
AA seq
677 aa
AA seq
DB search
MSQEILEKRVLALKYRPHRFEDLVGQSTVSQTLSLALDSDRLSHAYLFSGLRGSGKTSTA
RIMAKALLCSNGPTSKPCEVCDNCKSANSNRHLDIIEMDAASNRGIDDIKDLIEHTKYKP
SSGRFKVFIIDEVHMLTTQAFNALLKTLEEPPGFVKFILATTDPLKLPATILSRTQHFRF
NKIATSDVIHHLSHILNEENINYEKDALEILARTGQGSLRDTLTLLDQAIIFSKGKVNTT
SVVDMLGLIDPKLMDNIFSIILNKGDISQIIKDLESYEVSQICDEMAIYLKDKMLSKNTK
FDLLLFDRFFRILSDAKHLLAINSDGGFVLILTFMKMIEATNLKTIDDIINQVEKIEVKK
ETPISKPVEKIVEKVVEAPIEKIEEKVIERVIEKVEEIKSVFVEPETKIEELTPFDEVLV
QSDNIMDLGMIDAIEVVDYSTPFDELPTTPIVQKEQIIEKPKDIEIVEHKIEHQVQANIF
EEIEIVPIEEVFEGEDDVQNELYEKLTAKVYDRDPDLGECFEKNFIFNGFENKKLYITSY
AQDEDRKFLYKHFGIIKTFAQDIFGNDVELDFKKEEPSVLENKNEEKIEKVESEIIHEEL
SLKKQETQELIQEPNDDTGSMLEEIEMGSGCVADMHKGEITKPSQQELQLNDILNSKMLD
KAKELFDIKKITVKARS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagaaattttagaaaaaagagttttagccttaaaatatagacctcatagattt
gaagatttagttgggcaaagtacagtttctcaaactctttcattagctttggattcagat
agattatctcatgcatatctattttcagggcttagaggaagtggaaaaacttcaacagct
agaattatggcaaaagcattattatgttcaaatggtccaacttcaaaaccttgtgaagtt
tgtgataactgcaaaagtgcaaattcaaatagacatcttgatattattgaaatggatgct
gcatcaaatcgtggaattgatgatataaaagatttgatagaacatacaaaatataaacca
agttctggaagatttaaagtatttataatcgatgaagttcatatgcttacaactcaagct
tttaatgcacttttaaaaactttagaagaaccaccaggttttgtgaagtttattttagca
actacagacccattaaaattaccagctactattttgagtagaactcaacattttagattt
aacaaaattgcaacttctgatgtaattcatcatttatctcatattttaaatgaagaaaat
attaattatgaaaaagatgctttggaaattcttgcaagaactggacaaggaagtttaaga
gatactttaactttacttgaccaagcaataatcttttcaaaagggaaagtaaatacaaca
agtgttgtggatatgttaggtttaattgaccctaaacttatggataatattttttcaatt
attttaaataaaggtgatataagtcaaataattaaagatttagaaagttatgaagtttct
caaatctgtgatgaaatggctatttatttaaaagataaaatgctttctaaaaatacaaaa
tttgatttacttttatttgatagattttttagaattttaagtgatgcaaaacatttattg
gcaataaatagcgatggtggttttgttctaattttaacttttatgaaaatgattgaagct
acaaatttaaaaactattgatgatattataaatcaagttgaaaaaatagaagtaaaaaaa
gaaactccaatttctaagccagttgaaaaaatagtagaaaaagttgttgaggctcctatt
gaaaaaattgaagaaaaagtaattgaaagagttattgaaaaagtagaagagataaaatca
gtttttgttgaacctgaaacaaaaatagaagaactaactccctttgatgaagttttagtt
caaagtgataatattatggatttaggaatgattgatgctattgaagttgttgattattca
actccttttgatgaattacctacaactcctattgttcaaaaagagcaaataatagaaaaa
ccaaaagatatagaaattgttgaacataaaatcgaacatcaagtgcaagcaaatattttt
gaagagatagaaatcgttcctattgaagaagtatttgaaggggaagatgatgttcaaaat
gaattatatgaaaaattaactgcaaaagtttatgatagagaccctgatttaggtgaatgt
tttgaaaagaattttatatttaatggatttgaaaataaaaagttatatataacttcttat
gctcaagatgaagatagaaagtttttatataaacattttggaataataaaaacttttgct
caagatatatttggaaatgatgttgagttagattttaaaaaggaagaaccctccgtacta
gagaataaaaacgaagaaaagattgaaaaagtagaatctgaaattattcatgaagaactc
agtttaaaaaaacaagaaactcaagagttaattcaagagccaaatgatgatacaggttca
atgcttgaagagatagaaatgggttcaggttgtgtggcagatatgcacaaaggtgaaata
actaaaccttcacaacaagagttacagttaaatgatattttaaattcaaagatgcttgat
aaagcaaaagagttatttgatataaaaaaaatcactgtaaaagctagaagttaa
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