KEGG   Arcobacter venerupis: AVENP_0672
Entry
AVENP_0672        CDS       T06858                                 
Symbol
groEL
Name
(GenBank) 60 kD chaperonin (cpn60)
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
avp  Arcobacter venerupis
Pathway
avp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:avp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AVENP_0672 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:avp03019]
    AVENP_0672 (groEL)
   03110 Chaperones and folding catalysts [BR:avp03110]
    AVENP_0672 (groEL)
   03029 Mitochondrial biogenesis [BR:avp03029]
    AVENP_0672 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:avp04147]
    AVENP_0672 (groEL)
Enzymes [BR:avp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     AVENP_0672 (groEL)
Messenger RNA biogenesis [BR:avp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AVENP_0672 (groEL)
Chaperones and folding catalysts [BR:avp03110]
 Heat shock proteins
  HSP60 / Chaperonin
   AVENP_0672 (groEL)
Mitochondrial biogenesis [BR:avp03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    AVENP_0672 (groEL)
Exosome [BR:avp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AVENP_0672 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   AVENP_0672 (groEL)
  Exosomal proteins of breast cancer cells
   AVENP_0672 (groEL)
  Exosomal proteins of colorectal cancer cells
   AVENP_0672 (groEL)
  Exosomal proteins of bladder cancer cells
   AVENP_0672 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: QKF66242
UniProt: A0AAE7B9G1
LinkDB
Position
686368..688005
AA seq 545 aa
MAKEVLFSDNARNRLYAGVEKLADAVKVTMGPRGRNVLLQKSFGAPTITKDGVSVAREIE
LKDTLENMGAQLVKEVASKTADEAGDGTTTATILAHSIFKEGLRNVTAGANPIILKRGMD
KATEAILAELKKASRVVANKTEIEQVATISANSDKAIGAMIAEAMDKVGKDGVITVEEAK
GISDELAVVEGMQFDRGYLSPYFVTNAEKMIGEFNNPFILLYDKKISSLKEMLPILESVN
QSGRPLVIIAEDVDGEALATLVVNRLRGSLNIAAVKAPGFGDRRKAMLEDIAVLTGGTVI
SEEMGMKLETADFSCLGTASKVVIDKDNTTLVDGNGDKERVKARVNQIKAEISNTTSDYD
KEKLQERLAKLSGGVAVIKVGAASETEMKEKKDRVDDALSATRAAVEEGIVIGGGAALIR
AAAKVKLELEGDEAIGAAIIFRAIKAPLKQIATNAGFDAGVVANEVEKSTNENLGFNAAT
GEYVDMFEAGIVDPAKVERVAMQNAVSVASLLLTTEATVTDIKEDKPSMPSMPDMGGMGG
MPGMM
NT seq 1638 nt   +upstreamnt  +downstreamnt
atggcaaaagaagttttatttagtgataacgcaagaaatagattatacgcaggtgttgaa
aaattagcagatgctgtaaaagttacaatgggtccaagaggaagaaatgtattattacaa
aaatctttcggagctccaacaattacaaaagatggtgtatcagttgctagagaaatcgaa
ttaaaagatactttagaaaatatgggagcacaacttgtaaaagaagttgcttctaaaact
gctgatgaagcaggagatggaacaacaactgctactatcttagctcactcaatcttcaaa
gagggattaagaaatgtaacagcaggagcaaatccaattatcttaaaaagaggtatggat
aaagcaactgaagctattttagctgaacttaaaaaagcttcaagagttgttgctaataaa
actgaaattgagcaagttgctacaatttctgctaactctgataaagcaattggagctatg
attgctgaagctatggataaagttggaaaagatggtgttatcactgttgaagaagcaaaa
ggtatctctgatgaattagctgttgttgaaggtatgcagtttgatagaggatatttatct
ccatattttgtaacaaatgctgaaaaaatgattggtgaatttaacaatccatttatttta
ttatatgacaaaaaaatctcttctttaaaagagatgttaccaattttagaatctgttaat
caatctggacgtcctttagtaattattgcagaagatgttgatggtgaagcattagcaaca
ctggtagtaaatagattaagaggttctttaaatattgcagctgttaaagctccaggattt
ggtgatagaagaaaagctatgcttgaagatattgctgtattaactggtggaactgtaatt
tctgaagagatgggaatgaaacttgaaactgctgatttctcttgtttaggaactgcttca
aaagttgttattgataaagataatacaactttagttgatggaaatggtgataaagaaaga
gtaaaagctagagttaatcaaatcaaagctgaaatttctaatacaacttctgattatgat
aaagaaaaattacaagaaagacttgcaaaattaagtggaggagtagctgttattaaagtt
ggagctgcatctgagactgaaatgaaagagaaaaaagatagagttgatgatgcattaagt
gcaacaagagctgctgttgaagaaggtattgtaattggtggaggagctgcactaatcaga
gctgctgctaaagttaaactagaacttgaaggtgatgaagcaattggtgctgcaatcatt
tttagagctattaaagcgcctttaaaacaaattgctacaaatgctgggtttgatgctggt
gttgttgcaaatgaagttgaaaaatctacaaatgaaaatttaggatttaatgctgcaact
ggtgaatatgtagatatgtttgaagctggaattgttgaccctgcaaaagttgaaagagtt
gcaatgcaaaatgctgtttcagttgcatcacttttattaactacagaagctacagttaca
gatattaaagaagataaaccatcaatgccttctatgccagacatgggtggaatgggtgga
atgccaggaatgatgtag

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