Arcobacter venerupis: AVENP_0800
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Entry
AVENP_0800 CDS
T06858
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
avp
Arcobacter venerupis
Pathway
avp03420
Nucleotide excision repair
avp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AVENP_0800 (rep)
03430 Mismatch repair
AVENP_0800 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avp03400
]
AVENP_0800 (rep)
Enzymes [BR:
avp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AVENP_0800 (rep)
DNA repair and recombination proteins [BR:
avp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AVENP_0800 (rep)
MMR (mismatch excision repair)
Other MMR factors
AVENP_0800 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QKF66360
UniProt:
A0AAE7B9G5
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All DBs
Position
816604..818664
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AA seq
686 aa
AA seq
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MPLSNLNQEQLSAATCPAGYNLIIASAGTGKTSTIVGRIATLINSGVNPNEILLLTFTNK
AAAEMVARVAKFFGKDIAKQIMAGTFHSVSYKLLKELKVNITLKQPNELKTLFKSIYEKR
VFFERDDEANPYDGGYLYDMYSLYLNSNDGEEFGEWIKSKNANHELYTLIYEDVIAEFHE
LKTKYGYANFDDLLTIMLDTLKEKEFEFKEILVDEYQDTNPLQGRLLDAFRPKSLFCVGD
YDQSIYAFNGSDIGIISTFGDRYKDATVFTLRKNYRSTKPILDLATKVIEYNERVYEKKL
EVVRTENEHKPKLLAFNELFSQYEYISELISKSTTPHNDIAIIYRNNSSADGIEANLREF
SIPAKRKGGMSFFDSVEVKFILDILVMQITHNDMMAFIHVVEHGKGIGKAIAKDVFDALI
KLGDGDLLKGLFSPREDINNPYENGKVKNRQLGLFDDFIELGSISKFKDCNFEEAFLGNP
ILKHPKLNVDGGKYLYDIYLLMKHLRRTKIPETLVSSISSSMAYSKLKDFLSTKRATQKD
GTINPSQKTKSLAKINRKVMLLKNISRNFQDLSKFINSMILGGSEMSEGDGVNLLSIHAS
KGLEFKEVYVIDLMDGRFPNRKLMSKGGSIEEERRLFYVAVTRAKDILYLSYAKFDKIKK
MTFVASPFLREAGLVIKDDEESKTQD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatctaacttaaatcaagaacaactaagcgcagccacttgtcctgctggttac
aatcttattattgctagtgctggaactggaaaaacttctactattgtaggaagaattgca
acgcttataaatagtggcgtaaacccaaatgaaattttacttttaacttttacaaataaa
gcagcagctgaaatggtagcaagggttgctaaattttttggaaaagatattgccaaacaa
attatggcaggaactttccactcagtttcatataaacttttaaaagaattaaaagtaaat
ataactctaaaacaaccaaatgaattaaaaacacttttcaaatcaatctatgaaaaaaga
gtattttttgaaagagatgatgaagcaaatccttatgatggtggatatttgtatgatatg
tactctttatatctaaactcaaatgatggggaagagtttggtgaatggataaagtcaaaa
aatgcaaaccatgaattatatactttgatttatgaagatgtaattgctgaattccatgaa
ttaaaaacaaaatatggttatgcaaatttcgatgatttattaacaattatgttagatact
ttaaaagaaaaagagtttgaatttaaagagattttagttgatgaataccaagacacaaat
ccactacaaggaagacttcttgatgcttttagaccaaagtctttgttttgtgtaggagat
tatgaccaaagtatttatgcttttaatggctcagatattggaattatttcaacttttggt
gatagatataaagacgcaacagtttttactctacgaaaaaattaccgttcaacaaaacca
attctagatttagccacaaaagttatagaatataatgaaagagtttatgaaaaaaaactt
gaagttgtacgaactgaaaatgaacacaaaccaaaattattagcttttaatgaacttttt
tctcagtatgaatatatttcagaattgatttctaaaagtacaactcctcacaatgatata
gcgattatttatagaaacaattcaagtgccgatggaatagaagcaaatctaagagagttt
tcaattcctgcaaaacgaaaaggtgggatgagcttttttgattcggttgaagtgaaattt
atacttgatattttagttatgcaaatcactcacaatgacatgatggcttttattcacgtg
gttgaacatggaaaaggtattggaaaagcaattgcaaaagatgtttttgatgcacttata
aaactaggtgatggagatttattaaaaggtcttttttcaccaagagaagatataaataac
ccttacgaaaatggaaaagttaaaaatagacaattgggactttttgatgattttatagag
ttaggttcaatttcaaagtttaaagattgtaattttgaagaggcttttttagggaatcca
atcttaaaacatcccaaattaaatgtagatggcgggaaatatttatatgatatttattta
ctaatgaaacatttaagaagaacaaaaattccagagactttagtttcaagtatttcatct
tctatggcatattcaaaattaaaagattttttatctacaaaaagagcaacacaaaaagac
ggaacaataaatccaagtcaaaagacaaaatcacttgccaaaattaatagaaaggtaatg
cttttaaaaaatatatcaagaaattttcaagatttatcaaaattcataaattcaatgatt
ttaggtggaagtgaaatgagtgaaggagatggagtaaatcttctttcaattcatgcaagt
aaaggtcttgaattcaaagaagtttatgtaatagacttaatggatggaagatttccaaat
agaaaacttatgagtaaaggtggaagtatagaagaggaaagacgactgttttatgtagcc
gttacaagagcaaaagatattttatatctttcttatgctaaattcgacaaaataaaaaag
atgactttcgtagctagtccatttttaagagaagcgggacttgtaattaaagatgatgaa
gaatctaaaacacaagattaa
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