KEGG   Arcobacter venerupis: AVENP_0800
Entry
AVENP_0800        CDS       T06858                                 
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
avp  Arcobacter venerupis
Pathway
avp03420  Nucleotide excision repair
avp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:avp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AVENP_0800 (rep)
   03430 Mismatch repair
    AVENP_0800 (rep)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:avp03400]
    AVENP_0800 (rep)
Enzymes [BR:avp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AVENP_0800 (rep)
DNA repair and recombination proteins [BR:avp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AVENP_0800 (rep)
   MMR (mismatch excision repair)
    Other MMR factors
     AVENP_0800 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_11 AAA_30 DEAD ResIII
Other DBs
NCBI-ProteinID: QKF66360
UniProt: A0AAE7B9G5
LinkDB
Position
816604..818664
AA seq 686 aa
MPLSNLNQEQLSAATCPAGYNLIIASAGTGKTSTIVGRIATLINSGVNPNEILLLTFTNK
AAAEMVARVAKFFGKDIAKQIMAGTFHSVSYKLLKELKVNITLKQPNELKTLFKSIYEKR
VFFERDDEANPYDGGYLYDMYSLYLNSNDGEEFGEWIKSKNANHELYTLIYEDVIAEFHE
LKTKYGYANFDDLLTIMLDTLKEKEFEFKEILVDEYQDTNPLQGRLLDAFRPKSLFCVGD
YDQSIYAFNGSDIGIISTFGDRYKDATVFTLRKNYRSTKPILDLATKVIEYNERVYEKKL
EVVRTENEHKPKLLAFNELFSQYEYISELISKSTTPHNDIAIIYRNNSSADGIEANLREF
SIPAKRKGGMSFFDSVEVKFILDILVMQITHNDMMAFIHVVEHGKGIGKAIAKDVFDALI
KLGDGDLLKGLFSPREDINNPYENGKVKNRQLGLFDDFIELGSISKFKDCNFEEAFLGNP
ILKHPKLNVDGGKYLYDIYLLMKHLRRTKIPETLVSSISSSMAYSKLKDFLSTKRATQKD
GTINPSQKTKSLAKINRKVMLLKNISRNFQDLSKFINSMILGGSEMSEGDGVNLLSIHAS
KGLEFKEVYVIDLMDGRFPNRKLMSKGGSIEEERRLFYVAVTRAKDILYLSYAKFDKIKK
MTFVASPFLREAGLVIKDDEESKTQD
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgcctttatctaacttaaatcaagaacaactaagcgcagccacttgtcctgctggttac
aatcttattattgctagtgctggaactggaaaaacttctactattgtaggaagaattgca
acgcttataaatagtggcgtaaacccaaatgaaattttacttttaacttttacaaataaa
gcagcagctgaaatggtagcaagggttgctaaattttttggaaaagatattgccaaacaa
attatggcaggaactttccactcagtttcatataaacttttaaaagaattaaaagtaaat
ataactctaaaacaaccaaatgaattaaaaacacttttcaaatcaatctatgaaaaaaga
gtattttttgaaagagatgatgaagcaaatccttatgatggtggatatttgtatgatatg
tactctttatatctaaactcaaatgatggggaagagtttggtgaatggataaagtcaaaa
aatgcaaaccatgaattatatactttgatttatgaagatgtaattgctgaattccatgaa
ttaaaaacaaaatatggttatgcaaatttcgatgatttattaacaattatgttagatact
ttaaaagaaaaagagtttgaatttaaagagattttagttgatgaataccaagacacaaat
ccactacaaggaagacttcttgatgcttttagaccaaagtctttgttttgtgtaggagat
tatgaccaaagtatttatgcttttaatggctcagatattggaattatttcaacttttggt
gatagatataaagacgcaacagtttttactctacgaaaaaattaccgttcaacaaaacca
attctagatttagccacaaaagttatagaatataatgaaagagtttatgaaaaaaaactt
gaagttgtacgaactgaaaatgaacacaaaccaaaattattagcttttaatgaacttttt
tctcagtatgaatatatttcagaattgatttctaaaagtacaactcctcacaatgatata
gcgattatttatagaaacaattcaagtgccgatggaatagaagcaaatctaagagagttt
tcaattcctgcaaaacgaaaaggtgggatgagcttttttgattcggttgaagtgaaattt
atacttgatattttagttatgcaaatcactcacaatgacatgatggcttttattcacgtg
gttgaacatggaaaaggtattggaaaagcaattgcaaaagatgtttttgatgcacttata
aaactaggtgatggagatttattaaaaggtcttttttcaccaagagaagatataaataac
ccttacgaaaatggaaaagttaaaaatagacaattgggactttttgatgattttatagag
ttaggttcaatttcaaagtttaaagattgtaattttgaagaggcttttttagggaatcca
atcttaaaacatcccaaattaaatgtagatggcgggaaatatttatatgatatttattta
ctaatgaaacatttaagaagaacaaaaattccagagactttagtttcaagtatttcatct
tctatggcatattcaaaattaaaagattttttatctacaaaaagagcaacacaaaaagac
ggaacaataaatccaagtcaaaagacaaaatcacttgccaaaattaatagaaaggtaatg
cttttaaaaaatatatcaagaaattttcaagatttatcaaaattcataaattcaatgatt
ttaggtggaagtgaaatgagtgaaggagatggagtaaatcttctttcaattcatgcaagt
aaaggtcttgaattcaaagaagtttatgtaatagacttaatggatggaagatttccaaat
agaaaacttatgagtaaaggtggaagtatagaagaggaaagacgactgttttatgtagcc
gttacaagagcaaaagatattttatatctttcttatgctaaattcgacaaaataaaaaag
atgactttcgtagctagtccatttttaagagaagcgggacttgtaattaaagatgatgaa
gaatctaaaacacaagattaa

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