Arcobacter venerupis: AVENP_0879
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Entry
AVENP_0879 CDS
T06858
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
avp
Arcobacter venerupis
Pathway
avp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
avp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AVENP_0879 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avp03400
]
AVENP_0879 (uvrB)
DNA repair and recombination proteins [BR:
avp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AVENP_0879 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AVENP_0879 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
UB2H
SRP54
Viral_helicase1
DUF87
Motif
Other DBs
NCBI-ProteinID:
QKF66438
UniProt:
A0AAE7B6U3
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All DBs
Position
896853..898826
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AA seq
657 aa
AA seq
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MAKFEVVSDYEPAGDQPVAIKALSDSINAGNQYNTLLGVTGSGKTYTIAKVIEATQKPTL
IMTHNKTLAAQLYSEFKQFFPNNHVEYFISYYDYYQPEAYIPRSDLFIEKDSSINEELER
LRLSATASLLSFDDVIVIASVSANYGLGNPEEYKAMVQRVEVGFEYSQKQFLLKLVEMGY
KRNDKFFDRSDFRVNGDVIDIFPAYFEDEFIRVEFFGDEVESISKHEYITNSRTKSLDEV
IIYSVNPFVVSNEKLATAVKQIEEELSERLEYFQSANKLVEYQRLKQRVEFDLEMIEGTG
MCKGIENYARHLTGQKPEETPYSLLNYFQQMDRDFLLVVDESHVSLSQFRGMHAADRSRK
EVLVDYGFRLPSALDNRPLKFDEFIKKAPNYIFVSATPNELELNLSSVVAEQIIRPTGLL
DPIIDVVDSEFQVEKLHDEIKKVVAKNERVLVTVLTKKMAEELASYYADLGMKVKYMHSE
IDAIERNQIIRELRLGIFDVLIGINLLREGLDIPETSLVAILDADKEGFLRSKTSLIQTI
GRAARNERGRVILYAKRITGSMQFAIDETNRRRKIQEEHNIKNGITPVSTKRRLDQNLKL
EEYDDVAWKKEKLEKMPASERKKILIELNRQMKKAASDLNFEEAIRLRDEIAKVKEI
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atcgcaaagtttgaagttgtaagtgattacgaaccagcaggagatcaaccagttgctata
aaagccttaagtgattctatcaatgctggaaaccaatataacactcttttaggagttaca
ggttctggaaaaacttatacaattgcaaaagtgattgaggcgactcaaaaaccaactctt
atcatgactcacaataaaactcttgcagctcaattgtattcagaatttaaacagtttttc
ccaaataatcatgtggaatactttatttcatactatgattattatcagcctgaagcttat
attccaagaagcgacttatttattgaaaaagattcttcaataaatgaagagttagaaaga
ttaagattaagtgcaacagcttcacttctatcatttgatgatgttattgttattgcttca
gtttctgcaaactatggtttaggaaacccagaagaatacaaagcaatggtacaaagggtt
gaagttggatttgaatactctcaaaaacagtttttattaaagcttgtggaaatgggttat
aaaagaaatgataagttttttgataggtcagattttagagtaaatggagatgttattgac
atttttccagcttattttgaagatgagtttatacgagttgaattttttggtgatgaggtt
gaatcaatttcaaaacatgaatacatcacaaatagtagaacaaaatctttagatgaggta
attatttattcagttaatcctttcgttgtttcaaatgaaaaactagcaaccgctgtaaaa
caaattgaagaagagttatctgagagacttgagtattttcaaagtgcaaacaaacttgtg
gagtatcaaagactaaaacaaagagttgagtttgatttggagatgattgaaggaactgga
atgtgtaagggaatagaaaattatgcccgacatctaactggtcaaaaaccagaagagaca
ccttattctttattaaactattttcaacaaatggatagagactttttacttgtagttgat
gaatcacatgtttcactttcacagtttcgtggaatgcatgccgctgatagaagtagaaaa
gaagttttagtagattatggatttagacttccaagtgctttggataatagacctttaaaa
tttgatgaatttattaaaaaagctcctaattatatatttgtaagtgcaactccaaatgaa
ctagaactcaatctaagttcagttgtagctgaacaaattatccgaccaactggacttctt
gacccaattattgatgtggttgatagtgagttccaagtggaaaaacttcatgatgaaatc
aaaaaagtagtggcaaaaaatgaaagagttttagttacagttctaacgaaaaaaatggca
gaagaactagcttcttattatgcagatttaggaatgaaagttaaatatatgcatagtgaa
attgatgcaattgaaagaaatcaaatcattcgagagttgcgtttaggaatttttgatgta
cttattggaatcaatcttttaagagaaggtttggatattccagaaacttctcttgttgct
attttagatgctgataaagagggatttttaagaagtaaaacttcacttattcaaacaatt
ggacgagctgccagaaatgaaagaggaagagtaattttatatgcaaaaagaattacaggt
tcaatgcagtttgctatagatgaaacaaatagaagaagaaaaatccaagaagaacacaac
atcaaaaacggaattactcccgtatcaacaaaaagaagattagaccaaaatctaaaactt
gaagagtacgatgatgtggcatggaaaaaagagaaactagaaaaaatgccagcatctgag
agaaagaaaattctaatagagctaaatagacaaatgaaaaaagcagcaagtgatttgaat
tttgaagaagctattagactaagagatgaaattgctaaggttaaagagatataa
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