Arcobacter venerupis: AVENP_1025
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Entry
AVENP_1025 CDS
T06858
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
avp
Arcobacter venerupis
Brite
KEGG Orthology (KO) [BR:
avp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avp03016
]
AVENP_1025 (truD)
Enzymes [BR:
avp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AVENP_1025 (truD)
Transfer RNA biogenesis [BR:
avp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AVENP_1025 (truD)
Prokaryotic type
AVENP_1025 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QKF66580
UniProt:
A0AAE7E393
LinkDB
All DBs
Position
1039328..1040392
Genome browser
AA seq
354 aa
AA seq
DB search
MEQLQRYLNHSKIDVVFKQNKDDFVVTEIPLYEFSGEGEHLVLKIRKKDLATWDAIEILA
KFLNCSSREFGYAGLKDKNAMTVQSISVHRKYEEALKSFQNDNLKILETTYHNNKIKVGH
LKGNKFFIRLKRVGAIEKRKIEEALGSIVTNGIPNYFGFQRFGIEGDNYKKGKDIIDGKL
KEKRRNLKQMYINAYQSYLFNSWLSKRIEISKLIDAFEPKEIYQKLNLPLDVVKQMKKQK
HPFKLMTGDLLSHYPFGKIFTIENLEEESQKFNERDRVPTGLLSGNRVKNSVDLAYEIEK
EFEEKTGEDGARRFAWIFPEDISSNYKEEKNWMELQFYLPKGCYATEVIAEIIH
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
ttggaacaattacaaagatatttaaatcactcaaaaatagatgtggtttttaagcaaaac
aaagatgatttcgtggttactgaaatccctttatatgaattttcaggtgagggtgaacat
ctagttttaaaaattagaaaaaaagatttagcaacttgggatgctattgagattttagct
aagtttctaaattgtagtagtagagagtttggatacgcaggtttaaaagataaaaatgca
atgactgttcaatctatttcagttcacagaaaatatgaagaggctttaaaatcttttcaa
aatgataatttaaaaattcttgaaactacttatcacaataacaaaatcaaagtagggcac
ttaaaaggtaataaattttttattagactaaaaagagttggtgctatagaaaaaagaaaa
attgaagaggctttagggtcaattgtaactaatggaattcctaattatttcggtttccaa
agatttggaattgagggagacaattataaaaaaggtaaagatattattgatggaaaatta
aaagagaaaagaagaaatttaaagcaaatgtatatcaatgcttatcaaagttatcttttt
aactcttggctttctaaaagaatagaaatatcaaaacttattgatgcatttgaaccaaaa
gagatttatcaaaaattaaatttaccacttgatgttgtaaaacagatgaaaaaacaaaaa
catccatttaaattaatgaccggagatttactttctcattatccatttggaaaaatcttt
actattgaaaatttagaagaagaatcgcaaaaattcaatgaaagagatagagttccaaca
ggacttttaagtggaaatagagttaaaaattcagttgatttagcttatgaaattgaaaaa
gagtttgaagaaaaaacaggtgaagatggagcaagaagatttgcttggatttttcctgaa
gatatttcaagtaattataaagaagagaaaaactggatggaattacaattttatctacca
aagggctgttacgcaacagaagtaattgcagaaattatccattaa
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