Arcobacter venerupis: AVENP_1558
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Entry
AVENP_1558 CDS
T06858
Name
(GenBank) DEDDh 3'-5' exonuclease domain family protein
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
avp
Arcobacter venerupis
Pathway
avp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AVENP_1558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avp03400
]
AVENP_1558
DNA repair and recombination proteins [BR:
avp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AVENP_1558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QKF67110
UniProt:
A0AAE7BAV0
LinkDB
All DBs
Position
complement(1583677..1584414)
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AA seq
245 aa
AA seq
DB search
MAYYVLFDTETTGNQEDDKVIQFGAMIVDQKGKVEAFDELCSSDVQIKLEAMEVHNITPD
LLVGKPKAVETNFYKKLEELNSTENYLIAHNISFDMGMIKKEGFVNQYQLIDTLRCAKHL
FPELPYHRLQYIRYALELYKIEEAEAAKHNITIKAHDAIGDVLVMKLFLTKLVGKCREIY
PDYNPIEKLVDLTKTPVFIQTFKFGKYKGKDVEVVAREDAGYLNWMRSNMELDEDLRYTL
DKVLK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcatattatgtactatttgatacagaaacaactggaaaccaagaagatgacaaagtt
atccaatttggagcaatgattgttgatcaaaaaggtaaagttgaagcttttgatgaatta
tgttcaagtgatgttcaaataaaacttgaagctatggaagttcacaatattacaccagat
ttattagtaggaaaaccaaaagcagttgaaacaaacttttataaaaaacttgaagagtta
aattcaactgaaaattatctaatagctcacaatatttcttttgatatgggaatgataaaa
aaagaaggatttgtaaatcaatatcaattaattgatactttaagatgcgcaaaacatcta
tttccagaacttccataccacagacttcaatatataagatacgcccttgaactttataaa
attgaagaggctgaggctgctaaacataatatcactataaaagctcatgatgctattggt
gatgtgcttgtaatgaaactatttttaactaaacttgtaggaaagtgtagagaaatctat
cctgattataatccaatagaaaaacttgtagatttaacaaaaactcctgtgtttattcaa
acttttaaatttggtaaatataaaggaaaagatgttgaagtcgttgcaagggaagatgca
ggatacttaaattggatgagaagtaatatggaacttgatgaagatttaagatatactctt
gataaagttttaaaataa
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