Arcobacter venerupis: AVENP_2486
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Entry
AVENP_2486 CDS
T06858
Symbol
kdsA
Name
(GenBank) 3-deoxy-D-manno-octulosonate 8-phosphate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
avp
Arcobacter venerupis
Pathway
avp00541
Biosynthesis of various nucleotide sugars
avp01100
Metabolic pathways
avp01250
Biosynthesis of nucleotide sugars
Module
avp_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
avp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AVENP_2486 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
avp01005
]
AVENP_2486 (kdsA)
Enzymes [BR:
avp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
AVENP_2486 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
avp01005
]
Lipid A
AVENP_2486 (kdsA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF3657
Motif
Other DBs
NCBI-ProteinID:
QKF67990
UniProt:
A0AAE7E4J1
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Position
complement(2519056..2519856)
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AA seq
266 aa
AA seq
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MKILTGPCVLEDRDTVMRIAEKLKPLSEDKRIDFYFKASFDKANRTSITSFRGPGLDEGL
KIFEEIKEQFGYKVVTDIHESYQAAPAGEVMDILQIPAFLCRQTDLLVAAAKTPAIINIK
KGQFLAADAMKHPVEKILNTRGITEVSYETSEKARVWLCERGNTFGYGALVVDMRNLLLL
KQYAPVIFDATHSVQIPSTGGTTGGNSSFVPYMAKAAAAVGVDGFFFETHIDPSVAKSDG
PNMLRIEDLYKTVSDIFAIQDALGYN
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttaacaggaccatgtgttctagaagatagagatacagtaatgagaattgct
gaaaaattaaaaccattaagtgaagataaaagaattgacttttattttaaagcttcattt
gataaggcaaatagaacaagtataacttcatttagaggaccaggacttgatgagggatta
aaaatatttgaagagataaaagagcaatttggatataaagttgtaactgatattcatgaa
tcatatcaagcagcacctgctggtgaagttatggatattttacaaatccctgcattttta
tgtagacaaactgatttattagttgcagctgcaaaaacacctgcaattataaatatcaaa
aaagggcaatttttagcagctgatgctatgaaacatccagttgaaaaaattctaaataca
agaggaatcactgaggtttcttatgaaacatctgaaaaagctagggtttggctttgtgaa
agaggaaatacatttggatatggtgctttagttgttgatatgagaaatttacttttatta
aaacaatatgcccctgtaatcttcgatgcaacgcactctgtacaaattcctagtactggt
ggaacaacgggtggaaactcatcatttgttccgtatatggcaaaagcagcagcagctgtt
ggtgttgatggattcttttttgaaacacatattgacccatcagtagcaaaaagtgatgga
ccaaatatgcttagaattgaagatttatacaaaacagttagtgacatttttgcaatacaa
gacgctttaggatataattaa
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