Arcobacter venerupis: AVENP_2784
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Entry
AVENP_2784 CDS
T06858
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
avp
Arcobacter venerupis
Pathway
avp03420
Nucleotide excision repair
avp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AVENP_2784
03430 Mismatch repair
AVENP_2784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avp03400
]
AVENP_2784
Enzymes [BR:
avp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AVENP_2784
DNA repair and recombination proteins [BR:
avp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AVENP_2784
MMR (mismatch excision repair)
Other MMR factors
AVENP_2784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
QKF68265
UniProt:
A0AAE7BCW9
LinkDB
All DBs
Position
complement(2814116..2816170)
Genome browser
AA seq
684 aa
AA seq
DB search
MSENLLLSLNESQKTAAQHIDGPMLILAGAGSGKTKTITTRLAFLISIGIDPRSILTLTF
TNKAASEMRERAFSMLDSSMINTPPLLCTFHKFGLLFLKFHMSELNRKNNFIIIDTDDKK
RIIKSIDKDITTSLLVAEISKYKNSLLTPSEAKSAAQLKLYQQIAEIYEKYEAYLEKNNL
VDFDDLLLLPYRILSKNEKLANEISQKYQYIMVDEYQDTNELQYRLLRLLCSSHNNLCVV
GDDDQSIYGWRGATIKNILNFSEHFEDTNVVKLEENYRSTDTILNHANQLIEHNRDRLGK
RLIGTRQKGDSIRVYESQDENEETRKIIEDIKQLIDEGTSPKNIAILFRVNALSRSLEEG
FNKAGLNYKLVGGMKFYERTEIKDLIAYFRILTNANDNFSIKRVINKPKRGIGKTTIDKL
EAKSIESGKSIFDLIQQLDSEEISSIVGKKNARTLKVFEASILDLKELLEESKMKFFDTF
EETFDYRASYDNLPDGFERQANIDEFYGYIRDYFIQNPHLDLKDFLNEIALESEKDEYNG
EAVSMMSIHASKGLEFKKLFIIGFEEGFFPIVGDGSDLEEERRLGYVAITRAMDNLTLSF
VHSRFYKGKRTTLIKSRFLSESGLIKGCLTIEKQSGFRKGDLVQHKIFGMGRVIKSTNAG
KDYKLTINFGGTHRDILSSFVQKA
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaatttattattatcattaaatgaatcgcagaaaacagctgcacaacatatc
gatggcccaatgcttatacttgctggtgctggttctggtaaaactaaaactatcacaact
agacttgcatttttaatatcaataggtattgatcctaggtcaattttaactcttactttt
acaaataaagcagcaagtgaaatgagagaaagagcttttagtatgcttgattcttcaatg
ataaatactccacctttattatgtactttccataaatttggacttttatttttaaaattt
catatgagtgaattaaatagaaagaataatttcataataattgatacagatgataaaaaa
agaataataaaatctattgataaagatattacaacatcattattagtagcagaaatttca
aaatataaaaattcactcttaactccaagtgaagcaaaaagtgcagctcaattaaaactc
tatcaacaaatcgcagaaatttatgaaaaatatgaagcatatttagaaaaaaataatctt
gtagattttgatgatttattattacttccatatagaatattaagtaaaaatgaaaaactt
gcaaatgaaataagtcaaaaatatcagtatataatggtagatgagtaccaagatacaaat
gagttacaatatagacttttaagacttttatgttcaagtcataataatctttgtgttgtt
ggtgatgatgatcaatcaatttatggatggcgtggtgcaactataaaaaatattcttaat
ttctcagaacattttgaagatacaaatgttgttaaacttgaagaaaattatagatcaaca
gatactattttaaatcatgcgaatcaattgattgaacacaatagagatagacttgggaaa
agacttattggaacaagacaaaaaggtgattcaatcagagtttatgaatcacaagatgaa
aatgaagaaacaagaaaaataatagaagatattaaacaattaattgatgagggaactagt
cctaaaaatattgcaatattatttagagtaaatgccctatcaagatctttagaagagggt
tttaacaaagcaggtttaaactataaattagttggaggaatgaaattttacgaaagaact
gaaattaaagatttaattgcatattttagaattcttacaaatgctaatgataacttttca
atcaaaagagttataaataaaccaaaacgtggaataggtaaaacaacaattgataaactt
gaggcaaagtcaattgaaagcggtaaatcaatttttgatttaatacaacaattagattca
gaagagataagctcaattgtaggtaaaaaaaatgcaagaactctaaaggtatttgaagct
tctattttagatttaaaagagttattagaagagtcaaaaatgaaattttttgacactttt
gaagaaacatttgattatagagcatcatatgataatcttccagatggatttgaacgacaa
gctaatattgatgagttttatggatatattagagattattttattcaaaatccacactta
gatttaaaagattttttaaatgaaattgcacttgagagtgaaaaagatgaatataatgga
gaagctgtttcaatgatgagtattcatgcttctaaaggtttagagtttaaaaaacttttt
attattggctttgaagaaggatttttcccaattgttggtgatggaagtgatttggaagaa
gaaagaagattaggttatgtggcaattacaagagctatggataatctaactttatcattt
gttcattcaagattttataaagggaaaagaaccacattaataaaaagtaggtttttaagt
gaaagtggacttataaaaggatgcttaactattgaaaaacaatcaggttttagaaaaggt
gatttagtgcaacataagatttttggaatgggaagagttattaaatctacaaatgctgga
aaagattataaattaacaataaattttggcggaacacatagagatattttatcttcattt
gttcaaaaagcataa
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