Arcobacter venerupis: AVENP_2825
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Entry
AVENP_2825 CDS
T06858
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
avp
Arcobacter venerupis
Brite
KEGG Orthology (KO) [BR:
avp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avp03016
]
AVENP_2825
Enzymes [BR:
avp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AVENP_2825
Transfer RNA biogenesis [BR:
avp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AVENP_2825
Prokaryotic type
AVENP_2825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF1016_N
Motif
Other DBs
NCBI-ProteinID:
QKF68306
UniProt:
A0AAE7E5Y8
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All DBs
Position
complement(2855405..2856403)
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AA seq
332 aa
AA seq
DB search
MIKRFYPKNDKTLNFKFVQNDEDFIVEEQPIKFSGAGSFLVLKIKKDNCDTWELIDRLAK
FLNVFSNEIGYAGLKDKRATTTQYITIPKKYSKEIKLFKNKKIEILDTTLHNEKLNIGDL
EGNRFKINLHDVEVSDINHIQKIIKLINKDGMPNYFGYQRFGKEVVDNLAKAKDVVYGEE
IVKDKKLSKMLISAYQSSFFNAWLVERLKLSNDEFKLLDGDVFLDLQKDKLFTPKVITAN
IINDFHNFKITPTGLLPGRKVFKAVGEAALIEQKYDDVYIQEKGYRREALVFPKDVNCKY
DAAKKICNLDFILPKGSYATVLVEYLANRNFS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
ttgataaaaagattttatccaaaaaatgataaaactttaaatttcaaatttgttcaaaat
gatgaagattttatagttgaagaacaacctataaaattttcaggcgcaggaagtttttta
gttttaaaaattaaaaaagataactgtgacacttgggagttaattgatagattagcaaaa
tttctgaatgttttttcaaatgaaattggttatgctggactaaaagataaacgagctaca
acaactcaatatattacaattcccaaaaaatactcaaaagaaattaaactttttaaaaat
aaaaagattgaaattcttgatactactttgcataacgaaaaattaaatattggtgattta
gagggaaatagatttaaaataaatcttcacgatgttgaagtttctgatataaatcatatt
caaaaaatcattaaattaattaataaagatggtatgccaaactattttggttatcaaaga
tttgggaaagaagtagttgataatcttgcaaaagctaaagatgtagtttatggagaagag
atagttaaagataaaaaattatcaaaaatgttaatttctgcttatcaaagtagttttttt
aatgcttggttagttgaaagattgaaattatcaaatgatgaatttaaacttttagatgga
gatgtttttttagatttacaaaaagataaactatttactccaaaagttataacagcaaat
ataataaatgatttccataactttaaaattacaccaacaggtcttttacctggtaggaaa
gtattcaaagccgttggtgaagctgctttaatagaacaaaagtatgacgatgtatacata
caagaaaaaggttatagaagagaagccttagtttttccaaaagatgtaaattgtaaatat
gatgcagctaaaaaaatatgcaacttggatttcattcttccaaaaggttcatatgcaaca
gttttagttgaatatttagcaaatagaaatttttcttaa
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