Arcobacter venerupis: AVENP_2906
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Entry
AVENP_2906 CDS
T06858
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
avp
Arcobacter venerupis
Brite
KEGG Orthology (KO) [BR:
avp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avp03016
]
AVENP_2906 (truA)
Enzymes [BR:
avp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AVENP_2906 (truA)
Transfer RNA biogenesis [BR:
avp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AVENP_2906 (truA)
Prokaryotic type
AVENP_2906 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
HGD-D
Motif
Other DBs
NCBI-ProteinID:
QKF68381
UniProt:
A0AAE7E611
LinkDB
All DBs
Position
complement(2944978..2945700)
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AA seq
240 aa
AA seq
DB search
MNLKFVISYDGSCYQGSQKQPNGLTIEDKLLKAFKKINIETNIVLSGRTDKEVHATGQVF
NCIVPDFWSDFSKLKEVLNRNLPTSIKILKVSKVKDDFHSRFHAKKRDYRYIITTKATTP
FNDKFITYVPFVDEELLKKAIKEFIGVFDFKYFHKTGSDKDITVREIYNTIFYKYKDIYV
FKFTANSYLRSQIRLMVGFLLAINDKKLTIEDLKKQLRLEKNIFKTPAKANGLYLAKIKY
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaaatttgtaatctcttatgatggcagttgttatcaaggaagtcaaaaacaa
ccaaatggtttgactattgaagataaacttcttaaggcatttaaaaaaataaatatagaa
acaaatatagttttaagtggaagaaccgataaagaagtccatgcaacaggacaagttttt
aattgtattgttcctgatttttggagtgatttttctaaattaaaagaagttttaaataga
aatcttccaacttctattaaaatattaaaagtctcaaaagtaaaagatgattttcactca
aggtttcatgctaaaaaaagagattatagatatataattactacaaaagctacaactcct
tttaatgacaagtttataacttatgttccttttgttgatgaagagttattgaaaaaagca
ataaaagagtttatcggagtttttgattttaaatatttccataaaacaggaagtgataaa
gatataactgtaagagaaatttataatacaattttctataaatacaaagatatttatgta
ttcaaatttactgcaaattcatatttacgttctcaaattagattaatggttggtttttta
ttggcaattaatgataagaaattaacaatcgaagatttgaaaaaacagctaagattagaa
aaaaatatttttaaaacaccagcaaaggcaaatggattatatcttgcaaaaataaaatat
taa
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