Agrobacterium vaccinii: HRR99_00130
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Entry
HRR99_00130 CDS
T08171
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
avq
Agrobacterium vaccinii
Pathway
avq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HRR99_00130 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avq03400
]
HRR99_00130 (mutS)
DNA repair and recombination proteins [BR:
avq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HRR99_00130 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Rab_eff_C
Motif
Other DBs
NCBI-ProteinID:
UHS62763
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Position
circular:22727..25378
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AA seq
883 aa
AA seq
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MMEQYIEIKANNPGSLLFYRMGDFYELFFDDAAEASRALGITLTKRGQHLGQDIPMCGVP
VHAADDYLQKLILRGYRVAVCEQTEDPAEAKKRGSKSVVRRDVVRLVTPGTLTEDKLLSP
TESNYLMALARIKGSSEAQFALAWIDISTGVFRLAETTLTRLLADIWRIDPRELIVADSL
FHDEELRPVFDVLGRVAVPQPSILFDSATAEGRIARYFGVATLDGFGSFSRIEMAAAAAA
VAYVEKTQIAERPPLGAPERESAASTLFIDPATRANLELTKTLSGERDGSLLHAINRTVT
GGGARLLAERLMSPLTDPEQINTRLDAVAYLLDDVPLCDELREALKHVADMPRALSRLAL
DRGGPRDLGAIKVGLSAAADVATLLDHGLLPDELADALANLKALPTTLEQTLNATLSDEL
PLLKRDGGFVRDGWSNELDEVRALRDQSRRVIAGLQLQYSEETGIKSLKIKHNNVLGYFI
EVSAGHADVMMVGDEAKARFIHRQTMAGAMRFTTTELADLESRIANAAAQALTMELQAFD
QMVRAVVSHSEVIKAGALALAVIDVATSLACLAAEQAYCRPVIDGSMMFDIKGGRHPVVE
QALRRQSSGPFIANNCDLSSVGGHRNGAIWLLTGPNMGGKSTFLRQNALIAILGQIGSFV
PAESAHIGIVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDCSLVILDEIGRGTA
TFDGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLSEKLGRLSNATMKVREWEGDVIFLH
EVGPGAADRSYGIQVARLAGLPASVVERAKDVLTKLEDADRKNPASQLIDDLPLFQMAVR
REDSRSAGKSKVDEALKALNPDEMTPREALDALYALKKQLGNA
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcaatatatcgagatcaaggcgaacaaccccggttcgcttctgttctatcgc
atgggcgatttttacgagcttttcttcgatgatgcggcggaggcgtcgcgggcactgggc
attacactgacgaaacgcgggcagcatctggggcaggatattcccatgtgcggtgttccc
gtccatgccgctgacgactatctgcaaaagctcattctgcgcggctatcgcgttgccgtt
tgcgagcagaccgaagatcctgctgaagccaagaagcgtggctcgaaatccgttgttcgt
cgtgatgtcgtccggctggtcacacccggcacgctgacggaagacaagctgctctcgccg
acggaatccaattatctgatggcgctggcccgtatcaagggaagttccgaagcgcagttc
gcacttgcctggatcgacatctccacgggtgttttccgcttggcagaaacgacgctgacg
cggcttctggccgatatatggcgcatcgatccgcgcgaattgatcgttgccgacagcctg
tttcatgatgaggaactgaggccggttttcgatgtgctgggtcgtgtcgccgtgccgcag
ccctccattctgttcgacagtgcaacggccgaaggacgcattgcgcgctatttcggtgtc
gccacgctggatggcttcggaagtttttcccgcatcgaaatggctgccgcagccgcagcc
gttgcctatgtcgaaaaaacgcagatcgcagaacgcccgcccctgggcgcaccggagcgc
gaaagtgcggcctcgaccctgttcatagatccggccacccgcgccaatctggagctgacg
aaaaccctttcgggtgagcgcgatggatcgctgctgcacgccatcaaccgcaccgtgaca
ggtgggggcgcgcggctcttggccgagcggctgatgtcgcctttgacggacccggagcag
atcaatacccgtctcgacgccgttgcctatctgcttgatgatgttcccctgtgtgacgag
ttgcgggaggcgttgaagcatgtggcagatatgccgcgcgcgctttcgcgtcttgcactt
gaccgtggcgggccgcgtgatctgggtgcgatcaaggtggggctttctgccgctgccgac
gtcgcgacattgctggatcacggcttgctgccggatgagttggccgatgcgcttgcaaat
ttgaaggcgcttccgacgacgcttgagcagacgttgaatgcgacgttgtcggatgaattg
ccgctcttaaagcgcgatggcggtttcgtgcgcgatggttggagcaacgagctggacgaa
gtccgcgcactacgcgaccagtcccgtcgggtcatcgctggcttgcaactgcaatattcc
gaagagactggtatcaagtcgctgaagatcaagcacaacaatgtgctgggttacttcatc
gaggtcagcgccggacatgccgatgtcatgatggtgggtgatgaggcgaaggcccgcttc
atccaccgccagacgatggctggcgccatgcgctttaccacgactgagcttgccgatctg
gaaagccgcattgctaatgccgcagcgcaggccctgaccatggaattgcaggccttcgac
cagatggtgcgcgccgtcgtatcgcattcagaggtcatcaaggctggtgctctggcgctt
gcggtgatcgatgttgcaacaagccttgcctgtctggcggcagagcaggcctattgccga
ccggtcatcgatggctccatgatgtttgatatcaagggcggacgccacccggtggtggag
caggcgcttcgccgccaatcgagcgggccgttcatcgccaataactgcgatctgtcatcg
gtgggcggtcatcgcaacggcgccatctggctgctgacaggcccgaacatgggcggtaaa
tcgacattcctgcgccagaatgcgctgattgccattctcggccagatcggctccttcgtg
ccggcagagtctgcccatatcggcatcgtcgaccgcctgttttcccgtgtcggcgcatcg
gatgatctggcgcgcggtcgctcgaccttcatggtggagatggttgaaacggcggctatc
cttaatcaggccacggattgttcgcttgtcattctggatgagattggacgcggcacggca
acctttgacgggctctctatcgcctgggccgcggtggagcatctccatgaggtcaacagg
tgccgtggcctcttcgccactcatttccatgagttgacggtgctgtcggaaaagctgggg
cgtctctccaacgcaaccatgaaggtgcgggaatgggaaggcgacgttatctttctgcac
gaggtcgggcccggtgctgccgaccgttcctacggtattcaagtcgcgcggctggcgggc
ctgccggcgtctgtagtcgagcgtgccaaggacgttctgaccaagctggaggatgctgac
cgcaagaatccggcaagccagttgattgacgatctgccactgtttcagatggcggtgcgg
cgcgaggacagccgctcggctggcaaatcgaaagtcgatgaagcgctcaaggctttgaac
ccggatgaaatgacgccgcgggaggcgctcgatgcgctttatgccctcaagaaacaactt
ggcaacgcttga
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