Agrobacterium vaccinii: HRR99_01080
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Entry
HRR99_01080 CDS
T08171
Symbol
yidC
Name
(GenBank) membrane protein insertase YidC
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
avq
Agrobacterium vaccinii
Pathway
avq02024
Quorum sensing
avq03060
Protein export
avq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HRR99_01080 (yidC)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HRR99_01080 (yidC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRR99_01080 (yidC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
avq03029
]
HRR99_01080 (yidC)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
avq02044
]
HRR99_01080 (yidC)
Mitochondrial biogenesis [BR:
avq03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
HRR99_01080 (yidC)
Secretion system [BR:
avq02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HRR99_01080 (yidC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YidC_periplas
60KD_IMP
FlaX
Motif
Other DBs
NCBI-ProteinID:
UHS60216
LinkDB
All DBs
Position
circular:complement(210721..212541)
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AA seq
606 aa
AA seq
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MEKNRNYFIAIGLSVVIVLAWQFLYMNPRIEQQRRTEEARQAQQAAQQQTQPTTGTGTAA
APGTAAAPGGTLPGASGQQAATMSRDEALARSQRVQIDTNAISGSINLSGARLDDIKLKD
YHETVDDSSPLITLFSPSDTHDGYFTELGYIAGDAVGTVPGPSTIWTAPEGAKLTEQTPV
TLSFTNDKGVVFNRTLSIDDHYMITIVDKIENPGQEPVSFSTYGRITRNNKPATPAVFVI
HEGFLGVAGADGSLTEESYKNVEEKPYTLPKATGGWLGITDKYWAAAIVPPQTVPVETRY
THFTDGQPRYQADYRGDAVTVAPGQSVELKNLVFAGAKEVPLVSRYETQYAIPKFDLMID
WGWFYFITKPMFKLMDFFFRYFGNFGVAILLTTIVVKVLFFPLASKQYASMANMKRVQPK
MEELKAKHGDDRMAMQQAMMQLYKEEKINPVAGCWPMLLQIPVFFALYKVIYVTIEMRHA
PFFGWIHDLSAPDPTSLFNLFGLLPYDVPHFLMIGVWPIIMGITMFMQMRMNPTPPDPTQ
AMIFTWMPLIFTFMLASFPAGLVIYWAWNNTLSISQQAVIMKRHGAKIELFDNIKALFKR
KPVETK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaccgcaactactttatcgcgataggcctttcggttgtcatcgtgcttgcc
tggcagttcctgtatatgaacccgcgcatcgagcagcagcgtcggaccgaagaggcccgt
caggcccagcaggccgcgcagcagcagacgcagcccacaacgggcaccggcaccgccgct
gcgccgggaacggcagcagcaccgggtggcaccctgcccggcgcctccggccagcaggcc
gcaaccatgtctcgcgatgaagcgcttgccagatcgcagcgcgtacagatcgacacaaat
gccatttcaggttccatcaacctcagtggcgctcgtctggatgatatcaagctcaaggac
taccacgagaccgtggatgactcgagcccgctcatcacgctgttctcgccatccgacacc
catgacggctacttcacggagcttggctatatcgccggtgatgctgtgggcacggttccc
ggcccctccaccatctggaccgctcccgaaggcgccaagctaacagagcaaacgcctgtt
acgctgtccttcacaaacgacaagggcgtggttttcaaccgcacgctttcgatcgacgat
cactacatgatcactatcgtcgacaagatcgagaaccccggccaggagcctgtgtccttc
tcgacctatggccgcatcacccgcaacaacaagcctgcaacacctgccgtcttcgtcatt
cacgaaggctttctgggcgttgccggtgcagatggcagcctgacggaagaatcctacaag
aacgtcgaagaaaagccctacactctgccaaaggcaaccggtggctggctcggcattacc
gacaagtactgggctgctgccatcgtgccgccgcagaccgttcctgtcgaaacccgctac
acccacttcaccgatggtcagccgcgttatcaggccgactaccgtggcgatgcggttacc
gtggctccaggccagtcggtcgagctgaagaacctcgtttttgctggtgccaaggaagtt
ccgctcgtcagccgttacgaaacgcaatacgcgattccgaagtttgatctcatgatcgac
tggggctggttctacttcatcaccaagccgatgttcaaactgatggatttcttcttccgt
tactttggtaacttcggcgtggctatcctgctgaccaccatcgtcgtcaaggttctgttc
ttcccgcttgccagcaagcagtacgcttccatggccaacatgaagcgcgtgcagcccaag
atggaggaactgaaagccaagcatggcgatgaccgcatggccatgcaacaggccatgatg
cagctctacaaggaagaaaagatcaatccggtggccggttgctggccgatgctgttgcaa
attccggtgttcttcgcgctttacaaggtcatctacgtgaccatcgaaatgcggcatgcg
ccgttcttcggctggattcacgacctgtctgcgcccgatccgacctcgctgttcaacctg
ttcggccttctgccttacgacgttccgcacttcctaatgatcggcgtctggcctatcatc
atgggcatcaccatgttcatgcagatgcgcatgaacccgacgcctccagatccgacgcag
gccatgatcttcacctggatgccgctgatcttcacctttatgctggcgtccttccctgcc
ggtctcgtcatctactgggcatggaacaacaccctgtcgatttcccagcaagccgtgatc
atgaagcgccacggtgccaagatcgagctgttcgacaacataaaagcgttgttcaagcga
aagccggtggaaaccaaatga
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