Agrobacterium vaccinii: HRR99_02295
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Entry
HRR99_02295 CDS
T08171
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
avq
Agrobacterium vaccinii
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avq03009
]
HRR99_02295
Enzymes [BR:
avq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HRR99_02295
Ribosome biogenesis [BR:
avq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HRR99_02295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UHS60436
LinkDB
All DBs
Position
circular:479662..481710
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AA seq
682 aa
AA seq
DB search
MTFKDKPPRGGAKTFDRDRKPNSTGKPDAAREKKPFVAKAETVVSETAPTKPERISKIMA
RAGVASRRDVERMIMEGRVSLNGVKLESPAVNATLDDKIEVDGEPIRGAERTRLWLYHKP
SGLVTTNSDPEGRPTVFDNLPKELPRVLSIGRLDINTEGLLLLTNDGGLSRVLELPTTGW
LRRYRVRAYGEVDQAALDKLKDGIAVDGVLYGAIEATLDRTQGHNVWITMGLREGKNREI
KNVLGAIGLEVNRLIRISYGPFQLGDLPESQVVEVRGRMLRDQLGPRLIEAAGANFDAPI
YDAVTDDDEAPAQRPVKSEWTKRGDAEQNPRGGNFAEKRDNPRDRAQGKPDAKRPGKPFA
KGRDDERDDDRPKRPQMGSNRTANVWMAPGARPTRDGKERKSVRAEAESVFKPSAEADAR
RAIVRHRDGDGEWIRADKPAQDESRGRGRGERGEKSFGDRPARGGDRGDRPSGDRKPRVV
GERSDRPRGERSFGDRPARTDRPSGDRPNRSERPFSDRPSRGGERSDRPYGDRKPRDAGE
RSFGDRPDRGDRPARAERSFGDRPARSGERPYGDRKPREEGDRPRGDRPFGDKTRGARPF
GDKPREGRPSGGKPGGFGGKPAFGKPRGERSEGGFSGKGPGNKGPGGKGPGGNGPSNGPG
GKGPGGKPPGARGMTRNADRRR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgacattcaaagacaagccgccgcgcggcggggccaagacattcgaccgggaccggaag
ccgaattccactggcaagcccgatgcggcgcgtgagaaaaagcctttcgtcgcgaaggcg
gagaccgtcgtttcggagaccgcgccgacgaaaccagagcgcatctccaagatcatggcg
cgcgcaggcgtggcctcgcgccgcgatgtcgagcgcatgatcatggaaggtcgcgtttcg
ctgaacggcgtcaagctggaaagccctgcggtcaacgccaccctggatgacaagatagag
gtcgatggcgaaccgatccgtggtgccgaacgcacgcggctttggctctatcacaagcca
tccggcctggtgacgacgaattccgatcccgagggtcgcccgaccgttttcgacaatctg
ccgaaggagcttccccgcgttttgtccatcggacgtctggatatcaacacggaaggcctg
ctgctgctgaccaatgacggcggcctgtcgcgcgttctggaattgccgaccaccggctgg
ctgcgccgttaccgcgtgcgcgcctatggtgaggtcgatcaggctgctctcgacaagctg
aaggacggcattgccgtcgatggcgtgctctacggtgccatcgaggcaacgctcgatcgt
actcagggccacaatgtctggatcaccatgggtctgcgcgaaggcaagaaccgtgagatt
aagaacgtgctgggcgccatcggtcttgaggtcaaccgcctcatccgtatttcctatggt
ccgtttcagctgggtgacctgccggagagccaggtcgtggaagtgcgcggccgcatgctg
cgcgatcagcttggcccacgcctcatcgaggccgccggtgcgaacttcgatgcgccaatc
tacgatgccgtcaccgatgacgacgaagcgcctgcccagcgtcccgtgaagtccgaatgg
acgaagcgcggcgatgcggagcagaacccacgcggcggcaatttcgctgaaaagcgcgac
aatccgcgtgatcgtgcgcagggcaagccggatgcaaaacgtcccggcaaacctttcgcc
aagggtcgtgatgacgagcgggacgatgatcgtcccaagcgtcctcagatgggcagcaac
cgcacggccaatgtgtggatggcgccgggtgcaagaccaacgcgcgatggcaaggagcgc
aagtccgtgcgcgccgaagccgaaagcgtcttcaaaccatcggcagaagccgatgcccgt
cgcgccatcgtcagacacagggacggtgacggcgaatggattcgcgccgacaagcctgcg
caggacgaaagccgtggacgcggcagaggcgaacgcggcgagaaatcctttggtgaccgt
ccagctcgcggtggtgatcgcggtgaccggccatccggcgaccgcaaaccgcgtgttgtg
ggtgaacgttccgaccgcccgcgcggcgaacgctccttcggtgaccgtccggcccgcact
gacagaccgtctggagaccgccccaaccgttccgagcgaccgttcagcgaccgcccgtcc
cgtggtggtgaacgaagcgaccgcccatatggcgaccgcaagccgcgcgatgctggcgaa
cgttccttcggggatcgcccagaccgtggtgatcgcccagcgcgtgcagagagatcattc
ggtgatcgtccggcccgtagcggcgagcggccttacggcgatcgcaagccacgcgaggag
ggtgaccgtccccgtggcgaccgcccgttcggcgataagacgcggggagcaagacctttt
ggcgacaagccgcgtgaaggcaggccttccggtggcaagccgggtggcttcggcggcaag
cctgcatttggaaagccgcgtggcgagcgttccgaaggcggcttttccggcaagggcccc
ggcaataagggacctggtggcaaaggtccgggcggaaacggcccaagcaacggtcccggt
ggcaaaggccccggtggcaaacctcctggcgctaggggaatgacgcgtaatgcggatcgt
aggcggtga
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