Agrobacterium vaccinii: HRR99_02575
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Entry
HRR99_02575 CDS
T08171
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
avq
Agrobacterium vaccinii
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
HRR99_02575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
Apolipoprotein
HHH_6
OB_RRP5_4th
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UHS60485
LinkDB
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Position
circular:537922..540234
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AA seq
770 aa
AA seq
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MSADNARIAPTIASEINARAEQVKAAIALLDEGATVPFIARYRKEVTGGLDDTQLRTLAE
RLSYLRELNARRASIVDSITGQDKMTDELMVKIVSATTKAELEDLYLPYKPKRRTRAEIA
RERGLGPLAQAIWDDRSADPAKLAQAYVQGEVADVKAALEGARDIVAETMTENADLLKRL
RDYMRHNATFRAKVVDGKQATGEKFYDYFDHSEKWATVPGHRALAMLRGWNEEVLTLTID
VDADDPSPVKPAQRTIASAFDVRSAGPADAWLMEVAGWTWRVKLSMSLSLDLMRELRERA
EEEAIHVFARNLKDLLLAAPAGSRATMGLDPGIRTGVKVAIIDGTGKLLDTTTVYPFPPR
NDIRGTQAELASLIKKHNVELISIGNGTGSRETERLVADMLVQLTGAKPTKVIVSEAGAS
IYSASASAAAEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQGKLSR
SLDAVVEDAVNAVGVDLNTASAPLLARVSGLGSSIADAIVLHRDQTGPFASRKELLKVPR
LGQRTFEQCAGFLRIPNGKEPLDSSSVHPEAYGVAKKIVAACGRDLRSVMGDSAALKSLD
PKQFIDEQFGLPTVKDIIAELEKPGRDPRPSFKTATFADGVDEITDLKPGMLLEGTVTNV
AAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKVRVVEVDVKRKRIGLTMRK
DGGEAAPQPMREKGNANAMRHASAKPQTRAEAAPSGGALAAALAEAMKKR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagataatgcccgtatcgccccgacaatcgcttccgagatcaatgcccgcgcc
gaacaggtcaaggcagcgatcgcgctgctggacgaaggcgccaccgtgcccttcatcgcc
cgctaccgcaaggaagtgaccggcgggcttgacgatacgcaactgcgcacgctggcggag
cggctatcctatctgcgggaactcaatgcccgccgcgcatcgattgtcgattccatcacg
ggtcaggacaagatgaccgacgaactgatggtcaagatcgtctcggccacgacgaaagcg
gaactcgaagacctctaccttccctacaagcccaagcgccgcacccgcgccgaaattgcc
cgtgaacgcgggcttggaccgctggcgcaggccatctgggacgaccgcagcgccgacccg
gccaagctggcgcaggcttatgttcagggcgaggtggccgatgtgaaggcggcgctggag
ggcgcacgcgacatcgtggccgaaaccatgaccgagaatgccgatctgctgaagcggctg
cgtgactacatgcgccacaatgcaaccttccgcgccaaggtggtggatggtaagcaggcg
acgggtgagaagttctacgactatttcgaccattccgagaaatgggcgactgtgccgggc
catcgcgccttggccatgctgcgcggctggaacgaggaagtgttgacgctgaccatcgat
gtcgatgcggatgatccgtcgccggtcaaacccgcccagcgcaccatcgccagcgcgttt
gatgttcgcagtgcgggacctgccgatgcttggctgatggaagttgctggttggacctgg
cgcgtgaagttgtccatgtcgctttcgctcgacctgatgcgcgagctgcgggagcgggcg
gaagaggaggcaatccacgtctttgcccgcaacctcaaggacttgctgctggctgctccc
gccggttcgcgtgccaccatgggtctcgatccgggcatccgcaccggcgtcaaggtggcg
attatcgatggcaccggcaagctgctggatacgaccacggtctacccgttcccgccacga
aacgatattcgcggcacgcaggcagagcttgcgagcctcatcaagaagcacaatgtcgag
cttatctccattggcaacggcacaggcagccgtgaaacggagcggctggttgcggatatg
ctggttcagttgacgggcgcaaagccgacgaaggtcatcgtgtcggaagcaggggcctcg
atctattcggcctcggccagtgctgccgccgaattccccaatctggacgtctcgctgcgt
ggtgccgtctccattgctcgtcgtctgcaagacccgctggcggaactggtgaagatcgag
ccgaagtcgatcggtgtcggccagtaccagcacgatgtcgatcagggcaagctgtcgcgc
tctctggatgccgtcgtggaagatgcggtgaatgccgtgggcgtcgacctcaacacggcg
tcggctccgttgctggcccgggtttcgggcctcggtagttcgattgctgatgccatcgtg
ctgcatcgcgatcagaccggcccgtttgccagccgcaaggaactgctgaaagtgccgcgt
ctcggccaacgcacattcgagcaatgcgcgggctttctgcgcattcccaacggcaaggag
ccgctggattcgtcatcggtgcacccggaagcatacggcgttgccaagaagatcgtcgcc
gcctgcggtcgcgatctgcgttctgtcatgggtgacagcgccgcgctgaaatccttggat
ccgaagcagttcattgatgagcagttcggtcttcccacagtcaaagacatcatcgccgag
cttgaaaagccgggccgcgacccgcgcccaagcttcaagaccgcaacctttgccgatggc
gtggatgaaatcaccgacttgaagcctggtatgctgctggaaggcacggtgacgaatgtc
gcagccttcggtgccttcgtggatatcggcgtgcatcaggatggcctcgttcacgtgtcg
cagcttgcggaccgctttgtcaaagacccgcatgaggtggtaaaggccggtgacgtggtg
aaggtgcgcgtggtggaagtggacgtgaagcgaaagcgcatcggtctcaccatgcgcaag
gatggcggcgaggctgctccccagccgatgcgcgaaaagggcaacgccaatgccatgcgc
catgccagcgccaaaccgcagacgcgtgctgaggcagcgccatccggcggtgcattggcg
gcagctttggcggaagcgatgaagaaacggtga
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