Agrobacterium vaccinii: HRR99_02965
Help
Entry
HRR99_02965 CDS
T08171
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
avq
Agrobacterium vaccinii
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avq03036
]
HRR99_02965 (smc)
Chromosome and associated proteins [BR:
avq03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
HRR99_02965 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
DUF4947
ABC_tran
GCN5L1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UHS60554
LinkDB
All DBs
Position
circular:615414..618878
Genome browser
AA seq
1154 aa
AA seq
DB search
MKFNKLRLLGFKSFVEPSEFIIEPGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASG
MDDVIFSGSGNRPARNTAEVGLYLDNSDRTAPAAFNDADEIQVTRRIERENGSVYRINGK
EARAKDVQLLFADASTGARSPSMVGQGRIGELINAKPQARRQLLEEAAGISGLHSRRHEA
ELRLRAAEANLERLEDVTAQLESQIESLKRQARQANRFKMLSADIRAREATLLHIRWVEA
KHAEGEAESALNQATNVVAEKAQAQMEAAKAQGLASFKLPELRENEAKAAAALQRLQIAR
TQLDEETNRILRRRDELARRLAQLVEDIEREERMVSDNAEILARLDSEEAEILEILADSG
RYSEETREAFEASAAKLAESERVFASLTAERAEASANRTQLERTIRDLADRKARLDRQAS
DAAAEIENIDEKLSGLPDPSEKRESVEAAEIAVEDALIVVEEAESAVADARSAEALARGP
LDMARNRLNALETEARTISKMLAAGAVSGSFTPVAEELKVDRGFEAALGAALGDDLESPL
DPAAPAYWTANGEGEADPTLPDGVGSLLAHVAGPDALKRTLRQTGIVSNADDAKRLMPAL
KPGQRLVTKDGALFRWDGHITSADAPGNAALRLAQKNRLAELEGEVEEARYALEEAEEQL
AASADEIRLVESQLADARERSRLASRQLVEARDALSMAERASGDLLRRRDIVSEAINQIS
GQIEDIAAQEENARIELEEAADLSDLDLRLRESQLEVATDRSLVAEARAKHEGLKREAEA
RQRRINAIAQERATWQARAASASGHIATLREREDEARDELAELDIAPEEFDEKRRDLLTQ
LQKTEEARRAAADQLVEAENLQREADRAATIALSALAEAREKRGRAEERLVSAREKRQEG
EHRIREALNVEPHMAFRLTGLAGDAPMPEIRDVERDLDRLKIERERLGAVNLRADEEQAE
LSEKLAALIKERDDIIDAVRKLRAGIHNLNREGRERLVAAFDIVNTQFQRLFTHLFGGGT
AELQLIESDDPLEAGLEILARPPGKKPQTMTLLSGGEQALTAMALIFAVFLTNPAPICVL
DEVDAPLDDHNVERYCNLMDEMVASTETRFVIITHNPITMARMDRLFGVTMAEQGVSQLV
SVDLQMAERLIETV
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaacaagctgcgcctgctcggcttcaagtccttcgtcgagccctccgagttc
atcatcgagccgggactgacgggcgtcgtcggccccaatggctgcggcaagtccaatctt
gtcgaggcgcttcgctgggtgatgggcgaaaactcctacaagaatatgcgcgcatccggc
atggatgacgtgatcttctctggttccggcaatcgcccggcccgcaacactgccgaagtc
ggcctctatctcgacaattccgaccgcaccgcaccagccgccttcaacgatgccgatgaa
attcaggtcacacgacgcatcgagcgcgaaaacggctcggtctatcgcatcaatggtaag
gaagcccgcgccaaggacgtccagcttctgtttgccgatgcttccaccggcgctcgctcg
ccctccatggtggggcaggggcggatcggcgaactcataaacgccaaaccgcaggcgcgc
cgccagcttctggaagaggcggcgggcatttccggcctgcattcgcgccgccacgaggcg
gaactgcgcctgcgcgcggcagaggccaatctggaacggctggaagacgtcaccgctcag
ctggaaagccagatcgaaagcctgaaacggcaagcgcgacaggccaaccgcttcaagatg
ctatcagcagatatccgcgcccgtgaggcgaccttgctgcacatccgatgggtggaggcc
aagcacgccgaaggcgaagcagaaagcgcgctcaatcaggcgaccaatgtggtggctgaa
aaggcgcaggcgcagatggaagcggcaaaggcgcaagggcttgcgagcttcaagctgccg
gaactgcgtgaaaacgaagccaaggccgctgctgcgctgcaacgcctgcaaattgcccgc
acccaactggatgaggaaaccaaccgcatcctgcgccgccgcgacgagcttgcccgtcgc
cttgcgcaactagtcgaagatatcgagcgcgaagagcgcatggtttctgacaatgcagaa
atcctggcgcgtctggattcggaagaggcggagattctcgaaatcctggccgactcgggc
cgctattccgaggaaacccgcgaagcttttgaagcctccgccgcaaagctggccgagagc
gaacgtgttttcgcaagcctcaccgcagagcgagccgaggcctccgccaaccggacccag
cttgagcgcaccatccgcgatctggctgaccggaaagcgcggctggaccgtcaggcatcg
gacgccgctgccgagatcgaaaacatagatgaaaaactctccggcctgccggacccttcg
gaaaagcgcgaaagcgtggaagccgccgaaatcgccgtcgaagacgcgttgatcgtggtg
gaagaggcggaatcggctgtggcagacgcgcggtctgcggaggcgctggcgcgtggaccg
ttggatatggcgcgcaaccgtctcaacgcgctggaaaccgaagcgcgcaccatttccaaa
atgctggccgccggtgccgtctccggctcgttcacgccggttgccgaagaactgaaggtg
gatcgcggctttgaagcagccctcggtgctgccttgggtgatgatctcgaaagcccgctc
gaccctgccgccccggcctattggaccgcaaacggcgaaggtgaggcagacccaacgctg
cccgacggcgtgggatccctgctagcgcatgtcgcaggaccggatgcgctgaaacgcacg
ctacgccagacgggtatcgtttcaaacgctgatgacgccaaacgcttgatgcccgcgctg
aaacccggccagcgcctcgttactaaagatggcgcgctgtttcgctgggacggccacatc
accagtgcggacgcgcccggcaatgcagccctgcggcttgcccagaaaaaccgtcttgcc
gagctggaaggtgaagtcgaagaggcgcgctacgcattggaggaagccgaagagcagctt
gccgccagcgccgatgagattcgacttgtcgaaagccagcttgccgacgcgcgggagcgc
agccgtctcgcttcgcgccaactggtcgaagcccgcgacgcattgtcgatggccgaacgt
gcctctggcgatctgctgcgccgtcgcgatatcgtttccgaagcgatcaaccagatcagc
ggccagatcgaagacattgccgctcaggaagaaaatgcgcggatcgagctggaagaggct
gccgatctttccgacctcgatctgcgcctgcgcgaaagccagttggaagtcgcaaccgac
cgcagccttgtcgccgaagcccgcgcaaaacatgaaggcctgaaacgtgaggccgaggca
cgccagcgccgcatcaatgccatcgcgcaggaacgcgccacgtggcaggcccgcgccgcg
agcgccagcggtcatatcgctacgctgcgcgaacgtgaagacgaagcgcgcgacgaactt
gccgaactggatatcgcgccggaagaattcgatgaaaagcgccgcgatctcttgacgcaa
ctacaaaaaaccgaggaagcacggcgggccgctgcggatcaactggtcgaggcggaaaac
ctgcaacgcgaggcagaccgcgcagccaccatcgctttgtccgcgctggcagaagctcga
gaaaagcgcggccgcgccgaagagcgcctggtatctgcccgcgagaaacgtcaggaaggt
gaacatcgcatccgcgaggcgctgaacgtcgagcctcacatggcctttcgcctgacgggc
ttggcgggcgatgcgccgatgcccgagatccgcgatgtcgagcgagatctagaccggctg
aagatagaacgcgagcggctgggtgccgtcaacctgcgcgccgatgaggagcaggcagag
ctgtccgaaaagctggcggccctcatcaaggaacgcgacgacatcatcgatgcggtccga
aagctgcgtgccggcatccacaacctcaaccgcgaaggccgcgagcgactggttgccgcc
tttgatatcgtcaacacccagttccagcggttgttcacccacctgttcggcggtggcaca
gcggagctgcaactgatcgaatctgacgatcccttggaagcgggtctcgaaattctcgcc
cgcccgcccggcaagaagccgcagaccatgacgctgctatccggcggcgagcaggcgctg
accgccatggcactcatctttgccgtcttcctcaccaaccccgcaccgatctgcgtgctg
gacgaagtggacgcaccgctggatgaccataatgtcgagcgttactgcaacctgatggac
gagatggtggcctccaccgaaacacgcttcgtcatcatcacccacaaccccatcaccatg
gcccgcatggaccgcctgtttggggtcactatggcagagcagggcgtgtcgcaactggta
tcagtcgatttgcagatggcggaacggctgatcgagaccgtttga
DBGET
integrated database retrieval system
