Agrobacterium vaccinii: HRR99_04680
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Entry
HRR99_04680 CDS
T08171
Name
(GenBank) mechanosensitive ion channel family protein
KO
K03442
small conductance mechanosensitive channel
Organism
avq
Agrobacterium vaccinii
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avq02000
]
HRR99_04680
Transporters [BR:
avq02000
]
Other transporters
Pores ion channels [TC:
1
]
HRR99_04680
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Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MS_channel_1st_1
DUF3810
Motif
Other DBs
NCBI-ProteinID:
UHS60857
LinkDB
All DBs
Position
circular:complement(929187..930011)
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AA seq
274 aa
AA seq
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MDQQTTEIIVASQAALRQASALAVQYSFSIVGALVLLIIGWIAATLLQRWSFEGLSRIRG
FDETLARFFSGIVRYVVLILVLVMVLGQFGVQTASILAALGAAGLAVGLALQGTLQNIAA
GIMLLVLRPFRVGEYIETSAVTGTVVEIGLFATELKTSDGLYRLAPNSTLWNVPITNYSR
FPSRRHELSVNVPKGESLAEAQGMLMHLARSDSRVLLDPAPTTFVDSVSNDGATVTLRYW
ARSDNWFATTRDMTKSLKNAFDERDVRLSEQAAE
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcagaccaccgaaatcatcgttgcatcgcaggcggcgcttcgccaggccagc
gccctggcggttcaatactcgttctcgatcgtcggcgcgctcgtgcttctcatcattggc
tggattgccgcgacgctgctgcaacgttggtcgttcgaaggcctctcacgcattcgcggc
ttcgatgaaacgctggcgcgcttcttctctggcatcgtccgttacgtcgttctcattctc
gtgctggtcatggtgctcggacagttcggcgttcagacagcatcgatcctcgccgccctc
ggtgctgccggtctggccgtcggtctggccttgcagggcacattgcagaacatcgccgcc
ggcatcatgctgctcgttctgcgtccctttcgcgtcggtgaatacatcgaaacgagcgcc
gtcaccggcaccgtggtcgaaatcggcctgttcgcgacagagctgaagaccagcgacggc
ctctatcgcctcgccccgaattcgacactctggaacgtgccgattaccaactacagccgc
ttcccctcccgccgccacgaactcagcgtcaacgtgccaaagggcgaaagcctagcggaa
gcacagggcatgctgatgcacctcgcccgcagcgacagccgtgtccttttggaccccgcc
ccgacaactttcgtggattccgtgagcaacgacggcgctacagtgacactgcgctactgg
gcccgaagcgacaattggttcgccaccacccgcgacatgaccaagtccctcaaaaacgca
ttcgatgaacgcgacgtgagactgagcgaacaggcagcggagtga
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