Agrobacterium vaccinii: HRR99_04965
Help
Entry
HRR99_04965 CDS
T08171
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
avq
Agrobacterium vaccinii
Pathway
avq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HRR99_04965 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avq02000
]
HRR99_04965 (lptF)
Transporters [BR:
avq02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
HRR99_04965 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
UHS60912
LinkDB
All DBs
Position
circular:complement(981931..983100)
Genome browser
AA seq
389 aa
AA seq
DB search
MTLLERYILRRATQMFLVALLPVLAIIWTIQVLQRINLVTDTGQSMGSFVTLATMLLPTL
IPVVLPFALVIAITQTLTAMNTDSELAIIDASGAPRSIIFKPILILGTVLSLVSFGITNF
AEPPARTAARQMVAAAYADLLSSVIEEKTFRTIQDGLYVQIGQRQGRILRGLFVADRRDP
NYDLIYYAKEGMIDEGGTSLTMRDGEVQQKTPDGKVSVVKFLSYAFDLSTMSEKSDNETS
ISSSDASLSFLLSPDPTVDSYKKSPGGFRSELHRRLSDWMFPFVFALISLVVAADARSHR
EARLHPMVAALITAFMLRWLGFYFTNQVKQSAAFIPFVYAVPFVSGGIATFLLLSGKKLL
MPRAFGNALQTIQKRFSSSKAPGAGGQSA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttcttgaacgatacatattgcgacgtgcgacgcagatgtttctggtcgcgctg
ctgcctgttctggcgattatctggacgattcaggttcttcagagaatcaacctcgtcacc
gatacgggccagtccatggggtcgtttgtaacccttgcgaccatgcttttgccgaccctt
atccccgtcgttctgccgtttgcgctggtgattgccatcacccagacgctcaccgccatg
aatacggattcggaactggcgatcatagatgcatcaggcgcgccgcgctccatcatcttc
aagcccatcctcattctcggtacggttctgagcctcgtttcctttggaatcaccaatttt
gccgagccccctgcccgcaccgctgcgcggcagatggtggccgccgcctatgccgacctt
ctctcgtcggtcatcgaggaaaagacgttccgcaccattcaggatggtctttacgttcag
atcggtcaacgacagggtcgcattctgcgtggcctgttcgtggcggatcggcgcgatccg
aattacgacctcatctattatgccaaggaaggcatgatcgatgaaggcggcacatctctc
accatgcgcgatggcgaagtccagcagaagacgccggatggcaaagtgtccgtggtgaaa
ttcctgtcctacgcctttgacctttcgacgatgtcggagaagtccgataacgagacatcc
atttcatccagcgatgcgagcctgtcattccttctgtcgccggatccgactgtggacagt
tacaagaaatctcccggcggttttcgctcggagcttcaccgccgtttgtcggactggatg
ttcccatttgtttttgctctgatttcgctggttgtcgctgccgatgcgcgctcccaccgt
gaggcgcgcctgcacccgatggtcgcggccctcatcactgctttcatgctgcgctggctt
ggcttctacttcaccaatcaggtcaagcagagcgcggctttcatacccttcgtctatgcg
gtgccgttcgtcagcggcggtatcgccacgttcctgctgctctcgggtaagaaactgttg
atgccgcgcgcattcggcaatgctttgcaaaccatccagaagcgcttctcgtcttccaag
gcgcccggcgctggagggcaaagcgcatga
DBGET
integrated database retrieval system
