Agrobacterium vaccinii: HRR99_08530
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Entry
HRR99_08530 CDS
T08171
Name
(GenBank) DEAD/DEAH box helicase
Organism
avq
Agrobacterium vaccinii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_22
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
UHS61555
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All DBs
Position
circular:1712113..1713609
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AA seq
498 aa
AA seq
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MTTFSDLGLSQKVLSAIESAGYTTPTPIQEGAIPPALERRDICGIAQTGTGKTASFVLPM
LTLLEKGRARARMPRTLILEPTRELAAQVAENFEKYGKNHKLNVALLIGGVSFDEQDRKL
ERGADVLICTPGRLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKMIPFTRQ
TLFFSATMPPEIQKLADRFLQNPVRIEVAKPSSTAKTVTQRIVATHDKDYEKRAILRDLI
NAQTELKNAIIFCNRKKDVADLFRSLERHGFSVGALHGDMDQNSRTKMLAGFKDNQITLL
VASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGAAFTLVNRRDTKYLDA
IEKLIGEKIEWLSGDLTELPAPMESFAAERPRRGKEKEPRGRGRDRNRREAAPQIEVEEK
IIQPAAIVEVAANGGEKLKAERKQERAPRNFERNHNTTPPANDDNRRRHYRDYDDGPTPV
GFGDDIPAFMLIVASAKA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacattctctgatcttggcctgagccaaaaagttctttctgctatcgaaagtgcc
ggctacacgacaccgacacctattcaagaaggtgcgatcccgccagcgctggaacgacgc
gacatctgcggcatcgcgcaaacgggtacgggaaagaccgcatccttcgtgctgccgatg
ctgacccttctcgaaaaaggccgtgcgcgcgcaagaatgccgcgaaccctcattctggag
ccgacgcgcgaactcgcggcgcaggttgctgagaacttcgagaaatacggcaagaatcac
aagctcaacgtggctctcctcatcggcggcgtgtccttcgatgaacaggaccgcaagctg
gagcgcggcgcagacgttctgatctgcacccctggccgcctgctggaccattgcgaacgt
ggcaagctgttgatgactggcgtcgaaatcctcgtgatcgacgaagccgaccgcatgctc
gacatgggcttcattcccgatatcgaacgtatcgcgaagatgattcccttcacgcgtcag
acgctgttcttctcggccaccatgccgccagaaattcagaagctggccgaccgcttcctg
cagaacccggttcgcatcgaagtggccaagccgtcttcgaccgcgaagaccgtgacgcag
cgcatcgtcgccacgcacgacaaggattacgagaagcgcgccattctgcgcgatctcata
aacgctcagacggaactcaagaacgcgatcatcttctgcaaccgcaagaaagatgtcgcc
gatctgttccgttcgctggaacgtcacggcttctcggtcggcgctctgcatggcgacatg
gaccagaactcgcgcaccaagatgttggcgggcttcaaggataaccagatcaccctgctc
gtcgcttccgacgttgcagcacgcggtctcgacattcccgacgtcagtcacgtcttcaac
ttcgacgttccgatccatgcggaagactatgtccaccgcatcggtcgcacgggccgcgct
ggccgctccggtgctgcatttaccctggtcaaccgtcgtgacaccaagtatctggacgcc
atcgaaaagctgatcggtgaaaagatcgagtggctgagcggcgacctgaccgaactgccc
gccccgatggaaagctttgctgccgagcgcccgcgccgtggcaaggaaaaggaaccacgg
ggccgtggccgcgacagaaatcgtcgcgaagccgcaccacagatagaagtcgaagaaaag
atcattcagccagccgccatcgttgaagttgcggcaaacggaggcgaaaagttgaaggca
gagcgcaagcaagaaagagcacctcgcaatttcgagcggaaccacaacacgacgcctccc
gcaaacgacgataatcgccgtcgtcactaccgtgattacgacgatggcccgacaccagtc
ggcttcggcgatgacatccctgcgttcatgctgatcgtggcaagcgcgaaagcctga
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