Agrobacterium vaccinii: HRR99_09880
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Entry
HRR99_09880 CDS
T08171
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
avq
Agrobacterium vaccinii
Pathway
avq03030
DNA replication
avq03430
Mismatch repair
avq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HRR99_09880
03430 Mismatch repair
HRR99_09880
03440 Homologous recombination
HRR99_09880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avq03032
]
HRR99_09880
03400 DNA repair and recombination proteins [BR:
avq03400
]
HRR99_09880
Enzymes [BR:
avq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HRR99_09880
DNA replication proteins [BR:
avq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HRR99_09880
DNA repair and recombination proteins [BR:
avq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HRR99_09880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UHS61801
LinkDB
All DBs
Position
circular:complement(1977396..1977986)
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AA seq
196 aa
AA seq
DB search
MKTIAIDFETANEERGSACSVGLAWIEDGRIVRVEERLIRPRDMRFSPFNVAIHGIRPGD
VEDAPEFPEVMDEFIDDLRDSTMIAHNAAFDFSVMRASFDKYRQSYPQLSYFCSVKMSQR
VWPSLPSHKLNIIAHHLQLRFVHHNAAEDAVVCAAASIAAAKALAVEHIHHIPEKIGMVA
GRLHATGYAPCTMRKR
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaccatcgccatcgattttgaaaccgccaatgaagagcgtggcagcgcttgctcc
gttggattggcgtggatcgaggatggacggatcgtgcgggtggaagagcggttgatccgc
ccgagggatatgcggttttccccgttcaacgttgccatccacggcattagacccggcgac
gtggaagacgcgccggaatttcccgaggtgatggacgagttcatcgatgatctccgcgat
tcgacgatgattgcgcacaacgcggccttcgatttcagcgtcatgcgggcgagtttcgat
aagtatcgccagagctatccgcagctttcctatttttgcagcgtgaagatgtcgcaacgc
gtctggccgtcgctgccatcgcacaagctcaatatcattgctcaccatctgcaattgcgc
ttcgtgcaccacaatgctgccgaagacgccgttgtctgcgcggcggcatcgattgcggcg
gccaaagcgcttgccgtcgagcacatccaccacatccccgaaaagatcggcatggtggcc
gggcggctacacgccacaggctacgcgccctgcaccatgagaaaacgctga
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