Agrobacterium vaccinii: HRR99_10230
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Entry
HRR99_10230 CDS
T08171
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
avq
Agrobacterium vaccinii
Pathway
avq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRR99_10230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avq02000
]
HRR99_10230
Transporters [BR:
avq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HRR99_10230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
ABC_ATPase
AAA
AAA_23
nSTAND3
AAA_22
Rad17
AAA_14
NB-ARC
ORC-CDC6-like
RsgA_GTPase
AAA_28
WHEP-TRS
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UHS61867
LinkDB
All DBs
Position
circular:2057262..2058320
Genome browser
AA seq
352 aa
AA seq
DB search
MSFLTLHNIRKSFGQVQVVHDFNMAIEQGEFVSFLGPSGCGKTTILRMIAGFETPSDGSI
VINGKDQTTLKPNQRNIGMVFQAYALFPNMNVYENVAFGLKIAGKPKAEIDARVKEMLAL
IHLDHLADRYPYQMSGGQQQRVALARALAPKPQVLLLDEPLSALDAKIRVSLREEIRQIQ
RKLGITTIFVTHDQEEALSISDRIVVMNAGRADQIGSPFEIYNSPSTRFVASFVGTLNLI
DATVVDSSASTIQIGDQQVSLKKPLNKANGEKVTVALRPEAGSLGEANVGDVAISGTVTS
SHFLGSVIRTRLDVGGATLSFDMFNDPGTAPPAIGERITLKFASEDLMIVAD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagctttttgacactgcacaacatcagaaaatccttcggtcaggttcaggtcgtccat
gatttcaacatggcgatcgaacagggcgaattcgtttccttcctcgggccatcgggctgc
ggcaagaccaccattttgcggatgatcgccggtttcgagacgccgagcgacggctccatc
gtcatcaacggcaaggaccagacgacgctgaaacccaaccagcgcaacatcggcatggtg
tttcaggcctatgcgctgtttcccaacatgaatgtctacgagaacgtcgccttcggcctc
aagatcgcgggcaagcccaaggcggaaatcgatgcacgggttaaggaaatgctggcgctg
atccatctcgatcatctggccgaccgttacccctaccaaatgtcgggcgggcagcagcag
cgcgtggctctggcgcgagcgctcgccccgaagccgcaggtattgctgctggacgaacca
ctctcggcgctcgatgccaaaatccgcgtttcgctgcgcgaggaaatccgccagattcag
cgcaagctcggcatcaccaccattttcgtcacgcacgatcaggaagaggcgctctccatc
tccgaccgcatcgtggtcatgaatgccggacgcgccgaccagatcggctctcccttcgag
atttacaacagcccctccacccgcttcgtcgcttcctttgtcggcacgctgaacctgatc
gacgcgacggtcgtggattcctccgccagcaccatccagatcggcgaccagcaggtttcg
ttgaagaagccactgaacaaagccaatggcgaaaaggtcactgtggcgctgcggcccgag
gccggttctctgggtgaggccaacgtcggagacgtcgcgatatcgggcacggtgacctcc
agccacttcctcggctcggtcatccgtacgcgtctggatgtcggtggcgcgacgctgtcc
ttcgacatgttcaacgatcccggcaccgcaccaccggccattggtgagcgcatcacgctg
aaatttgcatcagaagatttgatgattgtagcagactga
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integrated database retrieval system
