Agrobacterium vaccinii: HRR99_13005
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Entry
HRR99_13005 CDS
T08171
Name
(GenBank) Lrp/AsnC ligand binding domain-containing protein
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
avq
Agrobacterium vaccinii
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avq03000
]
HRR99_13005
03036 Chromosome and associated proteins [BR:
avq03036
]
HRR99_13005
Transcription factors [BR:
avq03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
HRR99_13005
Chromosome and associated proteins [BR:
avq03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HRR99_13005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_IclR
MarR
MarR_2
HTH_5
TrmB
IR1-M
AsnC_trans_reg_3
HTH_27
HTH_36
DUF7343
HTH_Mga
HTH_34
AlkZ-rel
HTH_Crp_2
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
UHS62379
LinkDB
All DBs
Position
circular:complement(2646386..2646856)
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AA seq
156 aa
AA seq
DB search
MVKLLETGDLDHFDLKILEVLSEDGRMSMAQLSSQVGLSKTPCQTRLKRLVEEGYILGFR
ATLDPAKLGLEHIAFTEVKLSDTREKALEDFNTAVRKIREVEECHMIAGAFDYLLKVRTT
DIRKYRRVLGEKISSLPCVANTSTFVVMQSVKDVGI
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaacttcttgaaacaggcgatctggatcatttcgatttgaagatactggaggtg
ttgagtgaggatgggcgcatgtccatggcgcagctttccagccaggtcggcctttccaag
acgccgtgccagacgcgcctgaaacggctggtggaggagggctatattctcggcttccgc
gccacgctcgatcccgccaagctggggctggagcatattgctttcacagaggtcaaatta
tccgatacgcgggaaaaggcgctggaggatttcaacacggctgtgcgcaagatcagggaa
gtggaagagtgccacatgatcgccggtgcgttcgactatctgttgaaggtccgcaccacc
gatattcgcaaataccggcgggtgctgggcgagaaaatctccagcctgccctgtgttgcc
aacacctcgacattcgtggtgatgcaatcggtcaaggacgttggcatatga
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